RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 CNNM4Q6P4Q7 775 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 RBM43Q6ZSC3 357 aaKnown RBP8.5□□□□□ -1.05
SP140-202ENST00000373645 C1orf186Q6ZWK4 172 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 ANO5Q75V66 913 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 GPBP1Q86WP2 473 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 CCDC105Q8IYK2 499 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 ZDHHC14Q8IZN3 488 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 ABI1Q8IZP0 508 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 SIX5Q8N196 739 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 ST13P5Q8NFI4 369 aaPredicted RBP8.5□□□□□ -1.05
SP140-202ENST00000373645 SPATA20Q8TB22 786 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 SLC22A17Q8WUG5 538 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 RSAD2Q8WXG1 361 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 DDX12PQ92771 950 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 CEP170P1Q96L14 293 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 NECTIN4Q96NY8 510 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 GSDMAQ96QA5 445 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 TRIM9Q9C026 710 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 CYP26B1Q9NR63 512 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 AKT3Q9Y243 479 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 PPME1Q9Y570 386 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 PCDHA5Q9Y5H7 936 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 DOCK8Q8NF50 2099 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 DNAH14Q0VDD8 3507 aa8.5□□□□□ -1.05
SP140-202ENST00000373645 CACNA1IQ9P0X4 2223 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 PVALEFA0A1B0GWK0 134 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 RPN1P04843 607 aaKnown RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 AOC1P19801 751 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 EIF4BP23588 611 aaKnown RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 MTHFRP42898 656 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 CLCN5P51795 746 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 NPEPPSP55786 919 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 KRT17Q04695 432 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 CUL4BQ13620 913 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 GIT2Q14161 759 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 TARBP2Q15633 366 aaKnown RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 ZSCAN23Q3MJ62 389 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 ARSIQ5FYB1 569 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 NT5DC1Q5TFE4 455 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 PLA2G4FQ68DD2 849 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 EFCAB12Q6NXP0 572 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 PADI6Q6TGC4 694 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 DYMQ7RTS9 669 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 EXOC8Q8IYI6 725 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 RIN2Q8WYP3 895 aaPredicted RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 ERCC4Q92889 916 aaPredicted RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 CCDC47Q96A33 483 aaKnown RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 DNAJC19Q96DA6 116 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 CEP89Q96ST8 783 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 SH2D3AQ9BRG2 576 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 TIPINQ9BVW5 301 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 BLZF1Q9H2G9 400 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 DNAJB4Q9UDY4 337 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
SP140-202ENST00000373645 INPP5FQ9Y2H2 1132 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 R4GN57 208 aa8.49□□□□□ -1.05
SP140-202ENST00000373645 A0A0U1RQF3 1178 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 KRBA1A5PL33 1030 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 HOXA2O43364 376 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 KLRC4O43908 158 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 DGAT1O75907 488 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 KRT18P05783 430 aaKnown RBP8.48□□□□□ -1.05
SP140-202ENST00000373645 IDEP14735 1019 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 DARSP14868 501 aaKnown RBP8.48□□□□□ -1.05
SP140-202ENST00000373645 GUCY2CP25092 1073 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 CASP1P29466 404 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 RFC5P40937 340 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 SLC11A1P49279 550 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 GPC3P51654 580 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 AFF1P51825 1210 aaKnown RBP8.48□□□□□ -1.05
SP140-202ENST00000373645 ASIC1P78348 528 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 KCNB1Q14721 858 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 PTPN14Q15678 1187 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 MTERF2Q49AM1 385 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 ATAT1Q5SQI0 421 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 ODR4Q5SWX8 454 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 SASS6Q6UVJ0 657 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 TMEM92Q6UXU6 159 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 CCDC149Q6ZUS6 474 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 UNC13DQ70J99 1090 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 KIAA2013Q8IYS2 634 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 DTWD2Q8NBA8 298 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 TMEM169Q96HH4 297 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 IGSF21Q96ID5 467 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 SCLT1Q96NL6 688 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 RUSC1Q9BVN2 902 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 GTPBP4Q9BZE4 634 aaKnown RBP8.48□□□□□ -1.05
SP140-202ENST00000373645 GBP3Q9H0R5 595 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
SP140-202ENST00000373645 NRDE2Q9H7Z3 1164 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 KCNK12Q9HB15 430 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 PANK4Q9NVE7 773 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 TBC1D13Q9NVG8 400 aa8.48□□□□□ -1.05
SP140-202ENST00000373645 RMND1Q9NWS8 449 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms