RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 GIPC3Q8TF64 312 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 TIPINQ9BVW5 301 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 SGK1O00141 431 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 DDX3XO00571 662 aaKnown RBP eCLIP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 VCAM1P19320 739 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 HLFQ16534 295 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 TRIM16LQ309B1 348 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ZNF572Q7Z3I7 529 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 STKLD1Q8NE28 680 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ECSITQ9BQ95 431 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 WWP1Q9H0M0 922 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 GREM2Q9H772 168 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 CAAP1Q9H8G2 361 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 EURLQ9NYK6 297 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 APOBEC2Q9Y235 224 aaKnown RBP11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
SYNPO2L-201ENST00000372873 CES2O00748 559 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 LCA5LO95447 670 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 GPC5P78333 572 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 KIF22Q14807 665 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 SPDYCQ5MJ68 293 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 MIGA2Q7L4E1 593 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 FAM186BQ8IYM0 893 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 DDI1Q8WTU0 396 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 PRPF18Q99633 342 aaKnown RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 SAR1AQ9NR31 198 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 EPS15L1Q9UBC2 864 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 CCDC195A0A1B0GUA6 201 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 POTEMA6NI47 508 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 COPEO14579 308 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 CLDN3O15551 220 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 TTC4O95801 387 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 COILP38432 576 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 PFKFB3Q16875 520 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 SERPINI1Q99574 410 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 C7orf25Q9BPX7 421 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 KLHL25Q9H0H3 589 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 MANSC1Q9H8J5 431 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 GID8Q9NWU2 228 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 SPATA7Q9P0W8 599 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 ARMCX1Q9P291 453 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 CIDEBQ9UHD4 219 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 GGPS1O95749 300 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 KRT4P19013 534 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 RPL5P46777 297 aaKnown RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 DRAP1Q14919 205 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 ZNF571Q7Z3V5 609 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 RSAD2Q8WXG1 361 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 OCRLQ01968 901 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 ATP2A3Q93084 1043 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 TSNARE1Q96NA8 513 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 TTC25Q96NG3 672 aa11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 RPL26L1Q9UNX3 145 aaKnown RBP11.88□□□□□ -0.51
SYNPO2L-201ENST00000372873 FKBP6O75344 327 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 PDE8BO95263 885 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 ESRRBO95718 433 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 COASYQ13057 564 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 SLC45A4Q5BKX6 768 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 LIN9Q5TKA1 542 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 SFR1Q86XK3 245 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 GCNAQ96QF7 691 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 SHCBP1LQ9BZQ2 653 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 STARD13Q9Y3M8 1113 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 IQANK1A0A1B0GTG1 560 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 PALM3A6NDB9 673 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 ADCY7P51828 1080 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 NAA20P61599 178 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 PRAMEP78395 509 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 OCA2Q04671 838 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 NXNQ6DKJ4 435 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 DSTYKQ6XUX3 929 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 SH3TC2Q8TF17 1288 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 UBE2TQ9NPD8 197 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 KBTBD4Q9NVX7 518 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 STX18Q9P2W9 335 aaKnown RBP11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 SIK3Q9Y2K2 1263 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 KDM3AQ9Y4C1 1321 aa11.87□□□□□ -0.51
SYNPO2L-201ENST00000372873 LOC100653049A0A140TA62 436 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms