RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
NUP188-201ENST00000372577 RBBP8NLQ8NC74 664 aaPredicted RBP11.11□□□□□ -0.63
NUP188-201ENST00000372577 MIPOL1Q8TD10 442 aa11.11□□□□□ -0.63
NUP188-201ENST00000372577 ATP6V1E2Q96A05 226 aa11.11□□□□□ -0.63
NUP188-201ENST00000372577 AMACRQ9UHK6 382 aa11.11□□□□□ -0.63
NUP188-201ENST00000372577 PMLP29590 882 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 TMPRSS15P98073 1019 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 CENPCQ03188 943 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 HSP90AA5PQ58FG0 334 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 C4orf22Q6V702 233 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 L2HGDHQ9H9P8 463 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 AGPAT3Q9NRZ7 376 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 BFARQ9NZS9 450 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 PPP2R3BQ9Y5P8 575 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 BRAFP15056 766 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 SLC9A1P19634 815 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 EPHB1P54762 984 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 TMEM132DQ14C87 1099 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 AGBL2Q5U5Z8 902 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 TTI2Q6NXR4 508 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 C15orf52Q6ZUT6 534 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 MICAL1Q8TDZ2 1067 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 SCFD2Q8WU76 684 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 PRPF31Q8WWY3 499 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 SPON1Q9HCB6 807 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 PPME1Q9Y570 386 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 ESYT3A0FGR9 886 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 PSMD3O43242 534 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 MAPTP10636 758 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 NPEPPSP55786 919 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 PDIA2Q13087 525 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 ANGEL2Q5VTE6 544 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 CHMP6Q96FZ7 201 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 DEFB129Q9H1M3 183 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 DNAJC17Q9NVM6 304 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 PCSK1NQ9UHG2 260 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 CDH6P55285 790 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 DRP2Q13474 957 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 NLRP14Q86W24 1093 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 GSPT2Q8IYD1 628 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 PPP1R2P1Q96PQ5 205 aa11.1□□□□□ -0.63
NUP188-201ENST00000372577 SMG5Q9UPR3 1016 aaKnown RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
NUP188-201ENST00000372577 HSPA4LO95757 839 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 HNRNPH2P55795 449 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 ARPP19P56211 112 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 MRPS25P82663 173 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ERAP1Q9NZ08 941 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 HACL1Q9UJ83 578 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 GTPBP10A4D1E9 387 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 HLA-DRAP01903 254 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ACADSBP45954 432 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 REXO1L1PQ8IX06 675 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 VGLL2Q8N8G2 317 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 TMEM143Q96AN5 459 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 MED15Q96RN5 788 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 IRX2Q9BZI1 471 aaPredicted RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 ROPN1BQ9BZX4 212 aaPredicted RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 CARD9Q9H257 536 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 SPAG6O75602 509 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 HSPA9P38646 679 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 HIF1AQ16665 826 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 HIBCHQ6NVY1 386 aaPredicted RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 NIF3L1Q9GZT8 377 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 FAM8A1Q9UBU6 413 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 SKIP12755 728 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ARSEP51690 589 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 RPS6P62753 249 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 ANKRD13AQ8IZ07 590 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ZBED8Q8IZ13 594 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 MAML1Q92585 1016 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 TTC17Q96AE7 1141 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 FRMD8P1Q9BZ68 369 aaPredicted RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 GGA3Q9NZ52 723 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 GTF3C4Q9UKN8 822 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 TRIM33Q9UPN9 1127 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 APOBEC2Q9Y235 224 aaKnown RBP11.09□□□□□ -0.63
NUP188-201ENST00000372577 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 SPECC1L-ADORA2AF8WAN1 911 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 DPEP1P16444 411 aa11.09□□□□□ -0.63
NUP188-201ENST00000372577 GARTP22102 1010 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms