RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ANKZF1Q9H8Y5 726 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 NCANO14594 1321 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 INO80B-WBP1J3KQ70 363 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 IGF2BP3O00425 579 aaKnown RBP eCLIP26.91■■□□□ 1.9
CTSA-203ENST00000372459 ZRANB2O95218 330 aaKnown RBP eCLIP26.91■■□□□ 1.94e-10■■■■■ 65.3
CTSA-203ENST00000372459 GJB1P08034 283 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 NOA1Q8NC60 698 aaKnown RBP26.91■■□□□ 1.9
CTSA-203ENST00000372459 OR6J1Q8NGC5 347 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 TPCN2Q8NHX9 752 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 ZBTB10Q96DT7 871 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 INO80BQ9C086 356 aaPredicted RBP26.91■■□□□ 1.9
CTSA-203ENST00000372459 NOCTQ9UK39 431 aaKnown RBP26.91■■□□□ 1.9
CTSA-203ENST00000372459 PTPRJQ12913 1337 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 ANKRD62A6NC57 917 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 OGTO15294 1046 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 FAM189A1O60320 539 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 POU5F1BQ06416 359 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 GRM1Q13255 1194 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 TAF1CQ15572 869 aaPredicted RBP26.91■■□□□ 1.9
CTSA-203ENST00000372459 TMCO3Q6UWJ1 677 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 TSHZ1Q6ZSZ6 1077 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 RFFLQ8WZ73 363 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 FAM84AQ96KN4 292 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 PSMB7Q99436 277 aa26.91■■□□□ 1.9
CTSA-203ENST00000372459 H3BRB1 525 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 PDE2AO00408 941 aaPredicted RBP26.9■■□□□ 1.9
CTSA-203ENST00000372459 CXCR5P32302 372 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 AP3M2P53677 418 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 SEZ6Q53EL9 994 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 MORN1Q5T089 497 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 CCDC181Q5TID7 509 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 ZNF572Q7Z3I7 529 aaPredicted RBP26.9■■□□□ 1.9
CTSA-203ENST00000372459 NOP9Q86U38 636 aaKnown RBP26.9■■□□□ 1.9
CTSA-203ENST00000372459 SLC47A2Q86VL8 602 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 PALB2Q86YC2 1186 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 LRRC57Q8N9N7 239 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 TUT1Q9H6E5 874 aaKnown RBP26.9■■□□□ 1.9
CTSA-203ENST00000372459 TAS2R14Q9NYV8 317 aa26.9■■□□□ 1.9
CTSA-203ENST00000372459 ABLIM1O14639 778 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 ATP8B1O43520 1251 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 MMP3P08254 477 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 HOXD8P13378 290 aaPredicted RBP26.89■■□□□ 1.9
CTSA-203ENST00000372459 PROZP22891 400 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 TMOD1P28289 359 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 PDE6CP51160 858 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 MBTD1Q05BQ5 628 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 ATF7IP2Q5U623 682 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 MPZL3Q6UWV2 235 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 ZNF668Q96K58 619 aaPredicted RBP26.89■■□□□ 1.9
CTSA-203ENST00000372459 RNF14Q9UBS8 474 aa26.89■■□□□ 1.9
CTSA-203ENST00000372459 VNN1O95497 513 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 RHOXF2BP0C7M4 288 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 ABCB4P21439 1286 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 PAFAH1B1P43034 410 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 PHKA2P46019 1235 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 FAM193AP78312 1265 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 MAP2K5Q13163 448 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 DGKDQ16760 1214 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 SYCE1Q8N0S2 351 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 LINC01465Q8N7H1 131 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 EVPLQ92817 2033 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 RHOXF2Q9BQY4 288 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 ISCUQ9H1K1 167 aa26.89■■□□□ 1.89
CTSA-203ENST00000372459 CYP11B1P15538 503 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 TNFSF9P41273 254 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 ITIH3Q06033 890 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 SURF1Q15526 300 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 TMEM132AQ24JP5 1023 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 WDR49Q8IV35 697 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 PTPRHQ9HD43 1115 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 PRMT7Q9NVM4 692 aaPredicted RBP26.88■■□□□ 1.89
CTSA-203ENST00000372459 TUBBP07437 444 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 CHRNB2P17787 502 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 IRF5Q13568 498 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 TAF3Q5VWG9 929 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 RGMBQ6NW40 437 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 SLC35G2Q8TBE7 412 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 DHX38Q92620 1227 aaKnown RBP26.88■■□□□ 1.89
CTSA-203ENST00000372459 ELMO3Q96BJ8 720 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 THAP2Q9H0W7 228 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 CPSF3Q9UKF6 684 aaKnown RBP26.88■■□□□ 1.89
CTSA-203ENST00000372459 RAB21Q9UL25 225 aa26.88■■□□□ 1.89
CTSA-203ENST00000372459 PHACTR2O75167 634 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 RTN2O75298 545 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 GZMAP12544 262 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 KRT5P13647 590 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 TNFAIP2Q03169 654 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 BRD3Q15059 726 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 RPS6KA1Q15418 735 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 MTHFD1LQ6UB35 978 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 SLFN11Q7Z7L1 901 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 OR5B17Q8NGF7 314 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 TAF4BQ92750 862 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 AKT3Q9Y243 479 aa26.87■■□□□ 1.89
CTSA-203ENST00000372459 FTLP02792 175 aaPredicted RBP26.86■■□□□ 1.89
CTSA-203ENST00000372459 FMO1Q01740 532 aa26.86■■□□□ 1.89
CTSA-203ENST00000372459 CDR2Q01850 454 aa26.86■■□□□ 1.89
CTSA-203ENST00000372459 ZNF568Q3ZCX4 644 aa26.86■■□□□ 1.89
CTSA-203ENST00000372459 CFAP221Q4G0U5 840 aa26.86■■□□□ 1.89
CTSA-203ENST00000372459 SAPCD2Q86UD0 394 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms