RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 ROR1Q01973 937 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 TRIML2Q8N7C3 387 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 VPS39Q96JC1 886 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 FAM167AQ96KS9 214 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 TSPYL2Q9H2G4 693 aaPredicted RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 RPA1P27694 616 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 SLC29A2Q14542 456 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 CCDC124Q96CT7 223 aaKnown RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 SUGT1Q9Y2Z0 365 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 TBX3O15119 743 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 MKRN3Q13064 507 aaKnown RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 EZH2Q15910 746 aaKnown RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 SNRNP35Q16560 246 aaKnown RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 HEATR6Q6AI08 1181 aaKnown RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 RGS9BPQ6ZS82 235 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 LCA5Q86VQ0 697 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 CCNYL1Q8N7R7 359 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 ABTB1Q969K4 478 aaPredicted RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 FAM217BQ9NTX9 383 aaPredicted RBP22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 NAGPAQ9UK23 515 aa22.04■■□□□ 1.12
KCNMA1-209ENST00000372443 CREB3O43889 395 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 FAM107AO95990 144 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 TMEM253P0C7T8 217 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 KRT10P13645 584 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 TRMT10CQ7L0Y3 403 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 ARL8AQ96BM9 186 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 CRAMP1Q96RY5 1269 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 AP5M1Q9H0R1 490 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 UPF3AQ9H1J1 476 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 HERC5Q9UII4 1024 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 CPSF3Q9UKF6 684 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 PPFIA2O75334 1257 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 HSD17B3P37058 310 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 DUOXA2Q1HG44 320 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 CDKAL1Q5VV42 579 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 CCDC138Q96M89 665 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 GRB10Q13322 594 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 AGBL2Q5U5Z8 902 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 CXorf38Q8TB03 319 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 DHX35Q9H5Z1 703 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 HOXC10Q9NYD6 342 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 ITIH2P19823 946 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 SLC1A1P43005 524 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 PTGISQ16647 500 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 EPC2Q52LR7 807 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 DSTYKQ6XUX3 929 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 RNF139Q8WU17 664 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 DDX56Q9NY93 547 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 PRR12Q9ULL5 1215 aa22.03■■□□□ 1.12
KCNMA1-209ENST00000372443 BAZ2BQ9UIF8 2168 aaKnown RBP22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 S100BP04271 92 aaPredicted RBP22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 ARPP19P56211 112 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 CORO7P57737 925 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 COPS2P61201 443 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 CATSPER3Q86XQ3 398 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 TMEM120BA0PK00 339 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 CASKIN2Q8WXE0 1202 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 CENPKQ9BS16 269 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 MRPL4Q9BYD3 311 aaKnown RBP22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 APOEP02649 317 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 PMLP29590 882 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 TMTC4Q5T4D3 741 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 LRRC31Q6UY01 552 aa22.02■■□□□ 1.12
KCNMA1-209ENST00000372443 HERVK_113P62684 666 aa22.02■■□□□ 1.11
KCNMA1-209ENST00000372443 FSCBQ5H9T9 825 aa22.02■■□□□ 1.11
KCNMA1-209ENST00000372443 FGD4Q96M96 766 aa22.02■■□□□ 1.11
KCNMA1-209ENST00000372443 KBTBD4Q9NVX7 518 aa22.02■■□□□ 1.11
KCNMA1-209ENST00000372443 KIF1AQ12756 1690 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 EIF3EP60228 445 aaKnown RBP22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 PHEXP78562 749 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 ITPK1Q13572 414 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 WDR72Q3MJ13 1102 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 CDC42EP5Q6NZY7 148 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 KLC3Q6P597 504 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 RSPH3Q86UC2 560 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 KIF2BQ8N4N8 673 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 AGR3Q8TD06 166 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 XAB2Q9HCS7 855 aaKnown RBP22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 SENP1Q9P0U3 644 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 PITPNM2Q9BZ72 1349 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 PHKA2P46019 1235 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 ILDR1Q86SU0 546 aaPredicted RBP22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 RGL2O15211 777 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 TRPM8Q7Z2W7 1104 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 ABI1Q8IZP0 508 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 SYN2Q92777 582 aaPredicted RBP22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 PACSIN1Q9BY11 444 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 NYAP2Q9P242 653 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 LCMT1Q9UIC8 334 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 GOLGA8CPA6NN73 597 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 PIK3R2O00459 728 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 PRR5LQ6MZQ0 368 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 TRIM65Q6PJ69 517 aa22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 SUCLA2Q9P2R7 463 aaPredicted RBP22.01■■□□□ 1.11
KCNMA1-209ENST00000372443 TYK2P29597 1187 aa22■■□□□ 1.11
KCNMA1-209ENST00000372443 DTX3LQ8TDB6 740 aa22■■□□□ 1.11
KCNMA1-209ENST00000372443 DRC3Q9H069 523 aa22■■□□□ 1.11
KCNMA1-209ENST00000372443 GTSE1Q9NYZ3 720 aa22■■□□□ 1.11
KCNMA1-209ENST00000372443 SLC12A6Q9UHW9 1150 aa22■■□□□ 1.11
KCNMA1-209ENST00000372443 NEU2Q9Y3R4 380 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms