RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ETFBP38117 255 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CCT6AP40227 531 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 SKIV2L2P42285 1042 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 AFMP43652 599 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CDK8P49336 464 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 NSUN2Q08J23 767 aaKnown RBP eCLIP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 IL17AQ16552 155 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF362Q5T0B9 420 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 SYDE2Q5VT97 1194 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 TCERG1LQ5VWI1 586 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 C3orf62Q6ZUJ4 267 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 C16orf86Q6ZW13 317 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 ETFBKMTQ8IXQ9 262 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 PEX5LQ8IYB4 626 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 TRMT44Q8IYL2 757 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 NACC2Q96BF6 587 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 TAOK3Q9H2K8 898 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 JADE2Q9NQC1 790 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF180Q9UJW8 692 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CTDP1Q9Y5B0 961 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 FLT1P17948 1338 aa9.46□□□□□ -0.89
ATG4A-203ENST00000372232 FAM205AQ6ZU69 1335 aa9.46□□□□□ -0.89
ATG4A-203ENST00000372232 UBR3Q6ZT12 1888 aa9.46□□□□□ -0.89
ATG4A-203ENST00000372232 BTBD19C9JJ37 291 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 S100BP04271 92 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-203ENST00000372232 CCNFP41002 786 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 ARPC4P59998 168 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 CDK17Q00537 523 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 ITGA7Q13683 1181 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 MAP7Q14244 749 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 RCN1Q15293 331 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
ATG4A-203ENST00000372232 ARL6IP4Q66PJ3 421 aaKnown RBP9.46□□□□□ -0.9
ATG4A-203ENST00000372232 KIF2BQ8N4N8 673 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 C4orf32Q8N8J7 132 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 EIF1ADQ8N9N8 165 aaKnown RBP9.46□□□□□ -0.9
ATG4A-203ENST00000372232 GSDMAQ96QA5 445 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 EYA3Q99504 573 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 EIF2AQ9BY44 585 aaKnown RBP9.46□□□□□ -0.9
ATG4A-203ENST00000372232 BHMT2Q9H2M3 363 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 LARSQ9P2J5 1176 aaKnown RBP9.46□□□□□ -0.9
ATG4A-203ENST00000372232 INTUQ9ULD6 942 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 TBC1D30Q9Y2I9 924 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 GAKO14976 1311 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 MYPNQ86TC9 1320 aa9.46□□□□□ -0.9
ATG4A-203ENST00000372232 OAS1P00973 400 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 GLI1P08151 1106 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PTDSS1P48651 473 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 KRT83P78385 493 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 MRPS25P82663 173 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PARP6Q2NL67 630 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CDKAL1Q5VV42 579 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 NEDD1Q8NHV4 660 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 DQX1Q8TE96 717 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 C2orf49Q9BVC5 232 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 OSBPL10Q9BXB5 764 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CCDC134Q9H6E4 229 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 QPCTLQ9NXS2 382 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 BARHL2Q9NY43 387 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CCNB1P14635 433 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 TCP1P17987 556 aaKnown RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CASP1P29466 404 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 TCF7P36402 384 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CCT8P50990 548 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 GUCY2FP51841 1108 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PDE1BQ01064 536 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 INAQ16352 499 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 GSTA3Q16772 222 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 MUM1Q2TAK8 710 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 ODF2Q5BJF6 829 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 FKBP15Q5T1M5 1219 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 SPATA1Q5VX52 437 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 SLC2A7Q6PXP3 512 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 RSPH3Q86UC2 560 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 SP8Q8IXZ3 490 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 DAGLBQ8NCG7 672 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PIGOQ8TEQ8 1089 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 BAP1Q92560 729 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 HAUS1Q96CS2 278 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 CHP1Q99653 195 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 SIKE1Q9BRV8 207 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PFDN4Q9NQP4 134 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 SNTG2Q9NY99 539 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PCDHA6Q9UN73 950 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 TIMM22Q9Y584 194 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 PCDHA8Q9Y5H6 950 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 SNED1Q8TER0 1413 aa9.45□□□□□ -0.9
ATG4A-203ENST00000372232 KLRF2D3W0D1 207 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 LDHAP00338 332 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 LONP1P36776 959 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms