RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ANKRD35Q8N283 1001 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 CHST13Q8NET6 341 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 OR2W6PQ8NHA6 318 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 RASAL2Q9UJF2 1139 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 PPP2R3BQ9Y5P8 575 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 CHRNA3P32297 505 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 CNTN2Q02246 1040 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 EMC10Q5UCC4 262 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 JAMLQ86YT9 394 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 ZNF526Q8TF50 670 aaPredicted RBP31.04■■■□□ 2.56
SSBP3-204ENST00000371320 PSPC1Q8WXF1 523 aaKnown RBP31.04■■■□□ 2.56
SSBP3-204ENST00000371320 FMO2Q99518 471 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 ATG7O95352 703 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 PYGMP11217 842 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 TNNI1P19237 187 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 CLDN10P78369 228 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 PDCLQ13371 301 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 WDR44Q5JSH3 913 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 LMBRD2Q68DH5 695 aaPredicted RBP31.03■■■□□ 2.56
SSBP3-204ENST00000371320 SEPT14Q6ZU15 432 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 PRELID2Q8N945 189 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 C18orf8Q96DM3 657 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 PORCNQ9H237 461 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 CENPHQ9H3R5 247 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 GPRC5DQ9NZD1 345 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 CNOT8Q9UFF9 292 aaKnown RBP31.03■■■□□ 2.56
SSBP3-204ENST00000371320 AGO2Q9UKV8 859 aaKnown RBP31.03■■■□□ 2.56
SSBP3-204ENST00000371320 PCDHA3Q9Y5H8 950 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 CD2APQ9Y5K6 639 aa31.03■■■□□ 2.56
SSBP3-204ENST00000371320 CTNNA2P26232 953 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 ZNF844Q08AG5 666 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 FSTL1Q12841 308 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 SRLQ86TD4 932 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 ASAP3Q8TDY4 903 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 MAGOHBQ96A72 148 aaKnown RBP31.02■■■□□ 2.56
SSBP3-204ENST00000371320 RRP15Q9Y3B9 282 aaKnown RBP31.02■■■□□ 2.56
SSBP3-204ENST00000371320 STYXL1Q9Y6J8 313 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 SSC5DA1L4H1 1573 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 ERLIN2O94905 339 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 NLRP11P59045 1033 aaKnown RBP31.02■■■□□ 2.56
SSBP3-204ENST00000371320 SKIDA1Q1XH10 827 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 SH3D19Q5HYK7 790 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 CPNE8Q86YQ8 564 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 DEPTORQ8TB45 409 aa31.02■■■□□ 2.56
SSBP3-204ENST00000371320 DHX33Q9H6R0 707 aaKnown RBP31.02■■■□□ 2.56
SSBP3-204ENST00000371320 LRRIQ4A6NIV6 560 aa31.01■■■□□ 2.56
SSBP3-204ENST00000371320 TULP2O00295 520 aa31.01■■■□□ 2.56
SSBP3-204ENST00000371320 KIAA0391O15091 583 aaKnown RBP31.01■■■□□ 2.56
SSBP3-204ENST00000371320 CALCAP01258 141 aa31.01■■■□□ 2.56
SSBP3-204ENST00000371320 ACOT2P49753 483 aa31.01■■■□□ 2.56
SSBP3-204ENST00000371320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.01■■■□□ 2.565e-6■■□□□ 11.5
SSBP3-204ENST00000371320 BCAS4Q8TDM0 211 aa31.01■■■□□ 2.56
SSBP3-204ENST00000371320 SCP2P22307 547 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 GLRA2P23416 452 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 NAMPTP43490 491 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 R3HDM1Q15032 1099 aaKnown RBP31.01■■■□□ 2.55
SSBP3-204ENST00000371320 ZACNQ401N2 412 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 RUFY4Q6ZNE9 571 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 SLC7A3Q8WY07 619 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 LCMT1Q9UIC8 334 aa31.01■■■□□ 2.55
SSBP3-204ENST00000371320 K7ERI5 159 aa31■■■□□ 2.55
SSBP3-204ENST00000371320 HLA-DRAP01903 254 aa31■■■□□ 2.55
SSBP3-204ENST00000371320 PTGIRP43119 386 aa31■■■□□ 2.55
SSBP3-204ENST00000371320 DRG2P55039 364 aaKnown RBP31■■■□□ 2.55
SSBP3-204ENST00000371320 ZDHHC18Q9NUE0 388 aa31■■■□□ 2.55
SSBP3-204ENST00000371320 PCYOX1Q9UHG3 505 aa31■■■□□ 2.55
SSBP3-204ENST00000371320 MTUS1Q9ULD2 1270 aa31■■■□□ 2.55
SSBP3-204ENST00000371320 PPFIA2O75334 1257 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 C4BPAP04003 597 aaKnown RBP30.99■■■□□ 2.55
SSBP3-204ENST00000371320 ARL2P36404 184 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 PIK3CAP42336 1068 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 RWDD2BP57060 319 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 BIRC3Q13489 604 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 ZDHHC14Q8IZN3 488 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 PCDHB2Q9Y5E7 798 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 HIRAP54198 1017 aaPredicted RBP30.99■■■□□ 2.55
SSBP3-204ENST00000371320 TDRD10Q5VZ19 366 aaKnown RBP30.99■■■□□ 2.55
SSBP3-204ENST00000371320 SLFN12LQ6IEE8 588 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 SLC13A5Q86YT5 568 aaPredicted RBP30.99■■■□□ 2.55
SSBP3-204ENST00000371320 EFCAB13Q8IY85 973 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 KCNN1Q92952 543 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 ATP8A1Q9Y2Q0 1164 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 SNX24Q9Y343 169 aa30.99■■■□□ 2.55
SSBP3-204ENST00000371320 MYO1FO00160 1098 aa30.98■■■□□ 2.55
SSBP3-204ENST00000371320 PIGRP01833 764 aa30.98■■■□□ 2.55
SSBP3-204ENST00000371320 UNGP13051 313 aaPredicted RBP30.98■■■□□ 2.55
SSBP3-204ENST00000371320 ALDH5A1P51649 535 aaPredicted RBP30.98■■■□□ 2.55
SSBP3-204ENST00000371320 WNT7BP56706 349 aa30.98■■■□□ 2.55
SSBP3-204ENST00000371320 BPIFB4P59827 614 aa30.98■■■□□ 2.55
SSBP3-204ENST00000371320 ZNF677Q86XU0 584 aa30.98■■■□□ 2.55
SSBP3-204ENST00000371320 ZBTB45Q96K62 511 aaPredicted RBP30.98■■■□□ 2.55
SSBP3-204ENST00000371320 NIFKQ9BYG3 293 aaKnown RBP30.98■■■□□ 2.55
SSBP3-204ENST00000371320 RABEP2Q9H5N1 569 aa30.98■■■□□ 2.55
SSBP3-204ENST00000371320 MYH9P35579 1960 aaKnown RBP30.98■■■□□ 2.55
SSBP3-204ENST00000371320 USP2O75604 605 aaPredicted RBP30.97■■■□□ 2.55
SSBP3-204ENST00000371320 TTC27Q6P3X3 843 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 CCDC137Q6PK04 289 aaKnown RBP30.97■■■□□ 2.55
SSBP3-204ENST00000371320 CRELD2Q6UXH1 353 aaPredicted RBP30.97■■■□□ 2.55
SSBP3-204ENST00000371320 TXLNGYQ9BZA5 131 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 HAPLN2Q9GZV7 340 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms