RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 USP6NLQ92738 828 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 SGF29Q96ES7 293 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 PPP1R10Q96QC0 940 aaKnown RBP16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 SEMA4AQ9H3S1 761 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 MMRN2Q9H8L6 949 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 TBC1D23Q9NUY8 699 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 HERC5Q9UII4 1024 aaKnown RBP16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 COQ6Q9Y2Z9 468 aa16.97■□□□□ 0.31
PHACTR3-204ENST00000371015 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 FAM47E-STBD1D6RA91 191 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 KCNA2P16389 499 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 TKTP29401 623 aaKnown RBP16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 IL15P40933 162 aaPredicted RBP16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 SLC18A1P54219 525 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 PLTPP55058 493 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 CYP4A11Q02928 519 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 COBLL1Q53SF7 1204 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 TAF1BQ53T94 588 aaPredicted RBP16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 TMCO4Q5TGY1 634 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 FAM217BQ9NTX9 383 aaPredicted RBP16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 SELENONQ9NZV5 590 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
PHACTR3-204ENST00000371015 CCDC160A6NGH7 325 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 EXOC3O60645 756 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 MUTP22033 750 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 RASGRF1Q13972 1273 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 MAN2A1Q16706 1144 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 NLRP9Q7RTR0 991 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 CLNKQ7Z7G1 428 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 MICU3Q86XE3 530 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 LRRC57Q8N9N7 239 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 C10orf82Q8WW14 230 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 NSL1Q96IY1 281 aa16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 FAM207AQ9NSI2 230 aaPredicted RBP16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.3
PHACTR3-204ENST00000371015 SOBPA7XYQ1 873 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 KIAA0391O15091 583 aaKnown RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 TFAP2AP05549 437 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 PHKG2P15735 406 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 HOXA7P31268 230 aaPredicted RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ATP2C1P98194 919 aaPredicted RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ANKRD20A4Q4UJ75 823 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ZDHHC24Q6UX98 284 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 CCDC82Q8N4S0 544 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 STAMQ92783 540 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 CEP72Q9P209 647 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ADGRA3Q8IWK6 1321 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 TTC34A8MYJ7 566 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ADAM23O75077 832 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 PTCD1O75127 700 aaKnown RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 IFIT1P09914 478 aaKnown RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 HSPA6P17066 643 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 SLCO1A2P46721 670 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 RCAN1P53805 252 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 NPEPPSP55786 919 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 NUP107P57740 925 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 THOC5Q13769 683 aaKnown RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 TGFBIQ15582 683 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 CTC1Q2NKJ3 1217 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 SLFN11Q7Z7L1 901 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 BPHLQ86WA6 291 aaPredicted RBP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 FBXO25Q8TCJ0 367 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 EME1Q96AY2 570 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 USP21Q9UK80 565 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 SATB2Q9UPW6 733 aa16.95■□□□□ 0.3
PHACTR3-204ENST00000371015 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 GLI3P10071 1580 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 VCLP18206 1134 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 NONOQ15233 471 aaKnown RBP eCLIP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 KYNUQ16719 465 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 RWDD4Q6NW29 188 aaKnown RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 CATIPQ7Z7H3 387 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 TRIM55Q9BYV6 548 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 CELF4Q9BZC1 486 aaKnown RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 ARFGEF2Q9Y6D5 1785 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 CNOT3O75175 753 aaKnown RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 MTRF1O75570 445 aaKnown RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 MYCLP1P12525 358 aaPredicted RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 ANXA13P27216 316 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 NR5A1Q13285 461 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 PDAP1Q13442 181 aaKnown RBP16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 PDK3Q15120 406 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
PHACTR3-204ENST00000371015 PEX26Q7Z412 305 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms