RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ATRIPQ8WXE1 791 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 DNMT3BQ9UBC3 853 aaKnown RBP17.09■□□□□ 0.33
SSR4-204ENST00000370087 ZMYM2Q9UBW7 1377 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 TRIP11Q15643 1979 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 MAP1BP46821 2468 aaKnown RBP17.09■□□□□ 0.33
SSR4-204ENST00000370087 A0A087WWV3 80 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 NRG2O14511 850 aaPredicted RBP17.08■□□□□ 0.32
SSR4-204ENST00000370087 CCNT1O60563 726 aaKnown RBP17.08■□□□□ 0.32
SSR4-204ENST00000370087 SLITRK3O94933 977 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 TDGF1P13385 188 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 HOXA9P31269 272 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 TUSC3Q13454 348 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 TFDP1Q14186 410 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 SLC5A9Q2M3M2 681 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 AXDND1Q5T1B0 1012 aaPredicted RBP17.08■□□□□ 0.32
SSR4-204ENST00000370087 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 NEK8Q86SG6 692 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 TPH2Q8IWU9 490 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 HACE1Q8IYU2 909 aa17.08■□□□□ 0.32
SSR4-204ENST00000370087 CDV3Q9UKY7 258 aaKnown RBP17.08■□□□□ 0.32
SSR4-204ENST00000370087 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 POU5F1BQ06416 359 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 MTAPQ13126 283 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 STK3Q13188 491 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 PABPC1LQ4VXU2 614 aaKnown RBP17.07■□□□□ 0.32
SSR4-204ENST00000370087 ZBTB41Q5SVQ8 909 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 GALNT17Q6IS24 598 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 ZNF687Q8N1G0 1237 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 NFKBIZQ9BYH8 718 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 POLR3FQ9H1D9 316 aaPredicted RBP17.07■□□□□ 0.32
SSR4-204ENST00000370087 GPRC5CQ9NQ84 441 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 HEBP1Q9NRV9 189 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 USP18Q9UMW8 372 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 USP20Q9Y2K6 914 aa17.07■□□□□ 0.32
SSR4-204ENST00000370087 PDCD11Q14690 1871 aaKnown RBP17.06■□□□□ 0.32
SSR4-204ENST00000370087 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 XYLBO75191 536 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 EDN1P05305 212 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
SSR4-204ENST00000370087 POU2F2P09086 479 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 CEBPBP17676 345 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 MAGEA9P43362 315 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 PFKPQ01813 784 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 LMNB2Q03252 620 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
SSR4-204ENST00000370087 LPAL2Q16609 132 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 PIK3AP1Q6ZUJ8 805 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 MCRS1Q96EZ8 462 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 EIF2AK1Q9BQI3 630 aaKnown RBP17.06■□□□□ 0.32
SSR4-204ENST00000370087 SNTG2Q9NY99 539 aa17.06■□□□□ 0.32
SSR4-204ENST00000370087 USP24Q9UPU5 2620 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 TBX3O15119 743 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 RECQL4O94761 1208 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 GCFC2P16383 781 aaKnown RBP17.05■□□□□ 0.32
SSR4-204ENST00000370087 FCARP24071 287 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 OR1D2P34982 312 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 RPS9P46781 194 aaKnown RBP17.05■□□□□ 0.32
SSR4-204ENST00000370087 RAB33AQ14088 237 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 TANGO2Q6ICL3 276 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 CD300LGQ6UXG3 332 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
SSR4-204ENST00000370087 PRR5-ARHGAP8B1AHC4 643 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 ECI2O75521 394 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 DGAT1O75907 488 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 RHOP08100 348 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 RARRES1P49788 294 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 ARHGAP8P85298 464 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 MAEAQ7L5Y9 396 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
SSR4-204ENST00000370087 PIGOQ8TEQ8 1089 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 BORCS6Q96GS4 357 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
SSR4-204ENST00000370087 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.04■□□□□ 0.32
SSR4-204ENST00000370087 CHD8Q9HCK8 2581 aa17.04■□□□□ 0.32
SSR4-204ENST00000370087 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 I3L4J1 428 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 WNT7AO00755 349 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 CPLX1O14810 134 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 TBC1D4O60343 1298 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
SSR4-204ENST00000370087 LYPLA2O95372 231 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 SDHBP21912 280 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 FGFR3P22607 806 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 SPEM2Q0P670 501 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 GRM2Q14416 872 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 CDCA2Q69YH5 1023 aaPredicted RBP17.03■□□□□ 0.32
SSR4-204ENST00000370087 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.03■□□□□ 0.32
SSR4-204ENST00000370087 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 NOSTRINQ8IVI9 506 aa17.03■□□□□ 0.32
SSR4-204ENST00000370087 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms