RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 AGAP1Q9UPQ3 857 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 WBP4O75554 376 aaKnown RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 FGFR4P22455 802 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 CHKAP35790 457 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FMR1Q06787 632 aaKnown RBP eCLIP11□□□□□ -0.65
PRDM1-201ENST00000369089 LSAMPQ13449 338 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ART3Q13508 389 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SYDE2Q5VT97 1194 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SV2BQ7L1I2 683 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 USP37Q86T82 979 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 IQCKQ8N0W5 287 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ZCCHC7Q8N3Z6 543 aaKnown RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 MAGEB6Q8N7X4 407 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 USP38Q8NB14 1042 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TRPC4APQ8TEL6 797 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ZKSCAN3Q9BRR0 538 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 C1orf50Q9BV19 199 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 AS3MTQ9HBK9 375 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SLC38A10Q9HBR0 1119 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 HMG20AQ9NP66 347 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TRPV5Q9NQA5 729 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 EXOC7Q9UPT5 735 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FBP2O00757 339 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 PDE8AO60658 829 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SNX2O60749 519 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FYNP06241 537 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TPBGLP0DKB5 382 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 AKR1D1P51857 326 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 PTK2Q05397 1052 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 MRPL28Q13084 256 aaKnown RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 DNAJC3Q13217 504 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 MIGA1Q8NAN2 632 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FAM13CQ8NE31 585 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TRAF3IP1Q8TDR0 691 aaPredicted RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 PHKBQ93100 1093 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SNX27Q96L92 541 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 PNMA3Q9UL41 463 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ZNF510Q9Y2H8 683 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 A0A0D9SFI3 127 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 E7EWF7 191 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 GSTT2P0CG29 244 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 GSTT2BP0CG30 244 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 PLS3P13797 630 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 NCF2P19878 526 aaPredicted RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 CALML3P27482 149 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ZNF76P36508 570 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 SLC29A2Q14542 456 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 RNF43Q68DV7 783 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 RHOT2Q8IXI1 618 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 GDPD5Q8WTR4 605 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 CHID1Q9BWS9 393 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FAM96AQ9H5X1 160 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 MRPL40Q9NQ50 206 aaKnown RBP11□□□□□ -0.65
PRDM1-201ENST00000369089 GDF3Q9NR23 364 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ARHGAP26Q9UNA1 814 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SESN1Q9Y6P5 492 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 RNF103-CHMP3A0A140T963 221 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 LINC00854A0A1B0GVQ3 168 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 COPB2P35606 906 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 TCIRG1Q13488 830 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 PROSER3Q2NL68 480 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 TTC30AQ86WT1 665 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 CHCHD4Q8N4Q1 142 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 OR6Y1Q8NGX8 325 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 CCDC127Q96BQ5 260 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 ZNF333Q96JL9 665 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 OLFM1Q99784 485 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 LRMDAQ9H2I8 198 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 TRIM33Q9UPN9 1127 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 GNA14O95837 355 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 CYP2C9P11712 490 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 CSE1LP55060 971 aaKnown RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 VCPP55072 806 aaKnown RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 RHBDL3P58872 404 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 CAV1Q03135 178 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 MAN2A1Q16706 1144 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 DCAF17Q5H9S7 520 aaPredicted RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 FSCBQ5H9T9 825 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 TMEM214Q6NUQ4 689 aaKnown RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 TTC33Q6PID6 262 aaPredicted RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 UNC13DQ70J99 1090 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 KRT26Q7Z3Y9 468 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 EAF2Q96CJ1 260 aaPredicted RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 HSPBAP1Q96EW2 488 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 QKIQ96PU8 341 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 PCDH12Q9NPG4 1184 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 FKBP14Q9NWM8 211 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 MROH7Q68CQ1 1323 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 ADGRL3Q9HAR2 1447 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 A0A0J9YVX5 310 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 C5orf60A6NFR6 353 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
PRDM1-201ENST00000369089 INHBAP08476 426 aa10.99□□□□□ -0.65
PRDM1-201ENST00000369089 RARAP10276 462 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms