RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CTSAP10619 480 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 HARSP12081 509 aaKnown RBP20.21■□□□□ 0.83
CHTOP-202ENST00000368687 KCNE1P15382 129 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 IRS1P35568 1242 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 SYKP43405 635 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 KCNQ1P51787 676 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 ERVFC1P60507 584 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 COASYQ13057 564 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 PUS10Q3MIT2 529 aaKnown RBP20.21■□□□□ 0.83
CHTOP-202ENST00000368687 PLPP4Q5VZY2 271 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 ALKAL1Q6UXT8 129 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 UNC13DQ70J99 1090 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 GPR65Q8IYL9 337 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 EFHBQ8N7U6 833 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 STRA6Q9BX79 667 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 ZBP1Q9H171 429 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 CNTN3Q9P232 1028 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 PRG3Q9Y2Y8 225 aaPredicted RBP20.21■□□□□ 0.83
CHTOP-202ENST00000368687 PDCD11Q14690 1871 aaKnown RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 A0A0B4J269 797 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 B4GALT3O60512 393 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 SOD2P04179 222 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 OSTNP61366 133 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 HYAL1Q12794 435 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 ELAVL2Q12926 359 aaKnown RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 HSP90AA2PQ14568 343 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 CTC1Q2NKJ3 1217 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 TMEM173Q86WV6 379 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 CD302Q8IX05 232 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 MRPL43Q8N983 215 aaKnown RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 DDX27Q96GQ7 796 aaKnown RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 ZBTB45Q96K62 511 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 PPP1R10Q96QC0 940 aaKnown RBP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 MSTO1Q9BUK6 570 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 ADAM28Q9UKQ2 775 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 FAM50BQ9Y247 325 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 STYXL1Q9Y6J8 313 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 SF3B1O75533 1304 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHTOP-202ENST00000368687 UBE4BO95155 1302 aa20.2■□□□□ 0.82
CHTOP-202ENST00000368687 SMIM28A0A1B0GU29 152 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 A0A1B0GVL5 298 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 EIF3DO15371 548 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHTOP-202ENST00000368687 XPOTO43592 962 aaKnown RBP20.19■□□□□ 0.82
CHTOP-202ENST00000368687 CSPG5O95196 566 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 URODP06132 367 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 NRIP1P48552 1158 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 CREMQ03060 361 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 PPP2R3AQ06190 1150 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 DUSP6Q16828 381 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 ZC2HC1CQ53FD0 456 aaPredicted RBP20.19■□□□□ 0.82
CHTOP-202ENST00000368687 SYCP3Q8IZU3 236 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 CEP120Q8N960 986 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 ADAMTS19Q8TE59 1207 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 STAMQ92783 540 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 HERC2P3Q9BVR0 1158 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 MRPL17Q9NRX2 175 aaKnown RBP20.19■□□□□ 0.82
CHTOP-202ENST00000368687 MARCH5Q9NX47 278 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 CLDND1Q9NY35 253 aa20.19■□□□□ 0.82
CHTOP-202ENST00000368687 C2orf71A6NGG8 1288 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 TMEM189-UBE2V1I3L0A0 370 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 KIAA0391O15091 583 aaKnown RBP20.18■□□□□ 0.82
CHTOP-202ENST00000368687 ACTN4O43707 911 aaKnown RBP20.18■□□□□ 0.82
CHTOP-202ENST00000368687 TADA2AO75478 443 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 BMP1P13497 986 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 NAB2Q15742 525 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 LEXMQ3ZCV2 418 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 FAM26FQ5R3K3 315 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 FSIP1Q8NA03 581 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 BCL7CQ8WUZ0 217 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-202ENST00000368687 EMILIN2Q9BXX0 1053 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 RPF1Q9H9Y2 349 aaKnown RBP20.18■□□□□ 0.82
CHTOP-202ENST00000368687 TBC1D7Q9P0N9 293 aa20.18■□□□□ 0.82
CHTOP-202ENST00000368687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 TRAPPC3O43617 180 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 CXCL14O95715 111 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 LDHAP00338 332 aaKnown RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 KCNA5P22460 613 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 RPL9P32969 192 aaKnown RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 SNRPFP62306 86 aaKnown RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 ADAM15Q13444 863 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 USP41Q3LFD5 358 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 KIAA1841Q6NSI8 718 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 KANK3Q6NY19 840 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 PDXDC1Q6P996 788 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 ADGRD2Q7Z7M1 963 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 RNF168Q8IYW5 571 aaPredicted RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 POMGNT1Q8WZA1 660 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 CCDC47Q96A33 483 aaKnown RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 IGFLR1Q9H665 355 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
CHTOP-202ENST00000368687 AGO2Q9UKV8 859 aaKnown RBP20.17■□□□□ 0.82
CHTOP-202ENST00000368687 CASTOR2A6NHX0 329 aa20.16■□□□□ 0.82
CHTOP-202ENST00000368687 FAM189A1O60320 539 aa20.16■□□□□ 0.82
CHTOP-202ENST00000368687 EFEMP2O95967 443 aa20.16■□□□□ 0.82
CHTOP-202ENST00000368687 CXCL8P10145 99 aa20.16■□□□□ 0.82
CHTOP-202ENST00000368687 MYBP10242 640 aa20.16■□□□□ 0.82
CHTOP-202ENST00000368687 GARTP22102 1010 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms