RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PMM1Q92871 262 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 TAAR1Q96RJ0 339 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 ASCC2Q9H1I8 757 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 TUFT1Q9NNX1 390 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 A1CFQ9NQ94 594 aaKnown RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 DDX20Q9UHI6 824 aaKnown RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 SYNRGQ9UMZ2 1314 aa9.65□□□□□ -0.87
TPM3-213ENST00000368545 CAPN5O15484 640 aaPredicted RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 MAFGO15525 162 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 AP5Z1O43299 807 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 GDF9O60383 454 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 SLC25A27O95847 323 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 PTMAP06454 111 aaKnown RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 FAM153BP0C7A2 387 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 FAM157BP0CG42 384 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 ZNF75DP51815 510 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 MRPS9P82933 396 aaKnown RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 COBLL1Q53SF7 1204 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 C9orf50Q5SZB4 431 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 UNC13DQ70J99 1090 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 BADQ92934 168 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 KCNH7Q9NS40 1196 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 TCEAL9Q9UHQ7 104 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 TTLL8A6PVC2 850 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 UPK3BL1B0FP48 263 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 UPK3BL2E5RIL1 263 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 MED24O75448 989 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 CYP2C8P10632 490 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 PPP2R3AQ06190 1150 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 PAK1Q13153 545 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 RAB44Q7Z6P3 723 aaPredicted RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 CATSPER3Q86XQ3 398 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 C19orf47Q8N9M1 422 aaKnown RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 IL31RAQ8NI17 732 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 TRIB2Q92519 343 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 CDHR1Q96JP9 859 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 IWS1Q96ST2 819 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 EIF2AK1Q9BQI3 630 aaKnown RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 SEZ6LQ9BYH1 1024 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 AGO4Q9HCK5 861 aaKnown RBP9.64□□□□□ -0.87
TPM3-213ENST00000368545 PDLIM7Q9NR12 457 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 TBC1D22BQ9NU19 505 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 BTBD7Q9P203 1132 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 NRBP1Q9UHY1 535 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 RWDD2AQ9UIY3 292 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 DNM3Q9UQ16 869 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 DYRK1BQ9Y463 629 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 NFE2L3Q9Y4A8 694 aa9.64□□□□□ -0.87
TPM3-213ENST00000368545 LRRC37A2A6NM11 1700 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 MYMKA6NI61 221 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 PSMA7O14818 248 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 ATXN7O15265 892 aaPredicted RBP9.63□□□□□ -0.87
TPM3-213ENST00000368545 CBFA2T2O43439 604 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 TPM3P06753 285 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 THBS1P07996 1170 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 PLA2G4BP0C869 781 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 ARP10275 920 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 MYCLP1P12525 358 aaPredicted RBP9.63□□□□□ -0.87
TPM3-213ENST00000368545 NME2P22392 152 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 ATP11AP98196 1134 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 EPHA7Q15375 998 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 SPATA1Q5VX52 437 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 B3GNT9Q6UX72 402 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 KCNK18Q7Z418 384 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 ANKRD35Q8N283 1001 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 ZSWIM2Q8NEG5 633 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 TOX2Q96NM4 488 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 SAMM50Q9Y512 469 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 WDR81Q562E7 1941 aa9.63□□□□□ -0.87
TPM3-213ENST00000368545 MAP3K6O95382 1288 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 MYCLP12524 364 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 CACNB2Q08289 660 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 CBX2Q14781 532 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 SMYD4Q8IYR2 804 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 ADSSL1Q8N142 457 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 MORC4Q8TE76 937 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 HSD17B14Q9BPX1 270 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 HSD3B7Q9H2F3 369 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 UNC45AQ9H3U1 944 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 CTNND2Q9UQB3 1225 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 FAM50BQ9Y247 325 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 BICDL2A1A5D9 508 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 B4DLN1 442 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 E9PMD0 336 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 CNMDO75829 334 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 ATE1O95260 518 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms