RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 SLC12A6Q9UHW9 1150 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 C5orf60A6NFR6 353 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 PGK1P00558 417 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 LGALS2P05162 132 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 ZNF286BP0CG31 522 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 HOXD8P13378 290 aaPredicted RBP28.55■■■□□ 2.16
EFNA1-202ENST00000368407 MARK3P27448 753 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 HSD17B3P37058 310 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 FAM160B1Q5W0V3 765 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.55■■■□□ 2.162e-7■■■■□ 20
EFNA1-202ENST00000368407 EMSYQ7Z589 1322 aa28.55■■■□□ 2.16
EFNA1-202ENST00000368407 EYA4O95677 639 aa28.54■■■□□ 2.16
EFNA1-202ENST00000368407 SLC12A3P55017 1021 aa28.54■■■□□ 2.16
EFNA1-202ENST00000368407 LRRC41Q15345 812 aa28.54■■■□□ 2.16
EFNA1-202ENST00000368407 DPY19L2P1Q6NXN4 242 aa28.54■■■□□ 2.16
EFNA1-202ENST00000368407 ANO5Q75V66 913 aa28.54■■■□□ 2.16
EFNA1-202ENST00000368407 MAATS1Q7Z4T9 603 aa28.54■■■□□ 2.16
EFNA1-202ENST00000368407 HMX1Q9NP08 348 aaPredicted RBP28.54■■■□□ 2.16
EFNA1-202ENST00000368407 DDX20Q9UHI6 824 aaKnown RBP28.54■■■□□ 2.16
EFNA1-202ENST00000368407 TTC7AQ9ULT0 858 aaPredicted RBP28.54■■■□□ 2.16
EFNA1-202ENST00000368407 CETN3O15182 167 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 DGKDQ16760 1214 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 PLA2G4FQ68DD2 849 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 GLIS3Q8NEA6 775 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 C16orf70Q9BSU1 422 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 H0YHG0 523 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 MYCP01106 439 aaPredicted RBP28.53■■■□□ 2.16
EFNA1-202ENST00000368407 C6orf222P0C671 652 aaPredicted RBP28.53■■■□□ 2.16
EFNA1-202ENST00000368407 GJA9P57773 515 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 FSCN1Q16658 493 aaKnown RBP28.53■■■□□ 2.16
EFNA1-202ENST00000368407 IRF2BP2Q7Z5L9 587 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 SYCE1Q8N0S2 351 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 KCTD17Q8N5Z5 321 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 SUCLA2Q9P2R7 463 aaPredicted RBP28.53■■■□□ 2.16
EFNA1-202ENST00000368407 ADAMTS1Q9UHI8 967 aa28.53■■■□□ 2.16
EFNA1-202ENST00000368407 MNAT1P51948 309 aa28.52■■■□□ 2.16
EFNA1-202ENST00000368407 PLPPR4Q7Z2D5 763 aa28.52■■■□□ 2.16
EFNA1-202ENST00000368407 SYT2Q8N9I0 419 aaPredicted RBP28.52■■■□□ 2.16
EFNA1-202ENST00000368407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.52■■■□□ 2.16
EFNA1-202ENST00000368407 SMARCAD1Q9H4L7 1026 aa28.52■■■□□ 2.16
EFNA1-202ENST00000368407 XPNPEP3Q9NQH7 507 aa28.52■■■□□ 2.16
EFNA1-202ENST00000368407 TRAF3IP3Q9Y228 551 aa28.52■■■□□ 2.16
EFNA1-202ENST00000368407 GMNCA6NCL1 334 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 TRAPPC3O43617 180 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 DKC1O60832 514 aaKnown RBP eCLIP28.51■■■□□ 2.16
EFNA1-202ENST00000368407 OATP04181 439 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 RARRES1P49788 294 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 CPT1AP50416 773 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 PPP2R5EQ16537 467 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 PLCD3Q8N3E9 789 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 SCFD1Q8WVM8 642 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 CYFIP2Q96F07 1278 aa28.51■■■□□ 2.16
EFNA1-202ENST00000368407 UPF3AQ9H1J1 476 aaKnown RBP28.51■■■□□ 2.16
EFNA1-202ENST00000368407 WDR81Q562E7 1941 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 KCNK3O14649 394 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 ADAMTS4O75173 837 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 ZNF844Q08AG5 666 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 XKR3Q5GH77 459 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 RABEP2Q9H5N1 569 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 FAM114A2Q9NRY5 505 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 SEPT9Q9UHD8 586 aaPredicted RBP28.51■■■□□ 2.15
EFNA1-202ENST00000368407 STXBP5LQ9Y2K9 1186 aa28.51■■■□□ 2.15
EFNA1-202ENST00000368407 KCNH2Q12809 1159 aa28.5■■■□□ 2.15
EFNA1-202ENST00000368407 MTFR1Q15390 333 aa28.5■■■□□ 2.15
EFNA1-202ENST00000368407 UAP1Q16222 522 aaPredicted RBP28.5■■■□□ 2.15
EFNA1-202ENST00000368407 GPBP1Q86WP2 473 aa28.5■■■□□ 2.15
EFNA1-202ENST00000368407 CCDC26Q8TAB7 109 aa28.5■■■□□ 2.15
EFNA1-202ENST00000368407 UNC93B1Q9H1C4 597 aa28.5■■■□□ 2.15
EFNA1-202ENST00000368407 NAGPAQ9UK23 515 aa28.5■■■□□ 2.15
EFNA1-202ENST00000368407 DBR1Q9UK59 544 aaKnown RBP28.5■■■□□ 2.15
EFNA1-202ENST00000368407 RASSF9O75901 435 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 CYP11B2P19099 503 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 EIF3BP55884 814 aaKnown RBP28.49■■■□□ 2.15
EFNA1-202ENST00000368407 HLTFQ14527 1009 aaKnown RBP eCLIP28.49■■■□□ 2.15
EFNA1-202ENST00000368407 ARSHQ5FYA8 562 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 VPS36Q86VN1 386 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 RUSC1Q9BVN2 902 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 PACSIN1Q9BY11 444 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 RNPEPQ9H4A4 650 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 CNOT10Q9H9A5 744 aaKnown RBP28.49■■■□□ 2.15
EFNA1-202ENST00000368407 GOLGA6L7A0A1B0GV03 622 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 CHUKO15111 745 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 PTK2Q05397 1052 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 ADAM9Q13443 819 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 CLUL1Q15846 466 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 XKR9Q5GH70 373 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 GNASQ5JWF2 1037 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 LHX8Q68G74 356 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 FBXO46Q6PJ61 603 aaPredicted RBP28.49■■■□□ 2.15
EFNA1-202ENST00000368407 CCDC50Q8IVM0 306 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 KLHL7Q8IXQ5 586 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 TPCN2Q8NHX9 752 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.49■■■□□ 2.152e-6■■□□□ 12.8
EFNA1-202ENST00000368407 ANKEF1Q9NU02 776 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 ERAP1Q9NZ08 941 aa28.49■■■□□ 2.15
EFNA1-202ENST00000368407 NPHP3-ACAD11A0A0J9YXS1 232 aa28.48■■■□□ 2.15
EFNA1-202ENST00000368407 GTPBP10A4D1E9 387 aaKnown RBP28.48■■■□□ 2.15
EFNA1-202ENST00000368407 ARHGEF35A5YM69 484 aa28.48■■■□□ 2.15
EFNA1-202ENST00000368407 E7EVH7 732 aa28.48■■■□□ 2.15
EFNA1-202ENST00000368407 H3BRB1 525 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms