RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 CENPFP49454 3210 aa17.23■□□□□ 0.35
LMNA-203ENST00000368297 GTPBP10A4D1E9 387 aaKnown RBP17.22■□□□□ 0.35
LMNA-203ENST00000368297 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 CXCL8P10145 99 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 CD52P31358 61 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 GTF2H1P32780 548 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 GRM5P41594 1212 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 ADKP55263 362 aaKnown RBP17.22■□□□□ 0.35
LMNA-203ENST00000368297 WNT7BP56706 349 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 MCCD1P59942 119 aaPredicted RBP17.22■□□□□ 0.35
LMNA-203ENST00000368297 LPIN1Q14693 890 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 IQCDQ96DY2 449 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 ACAP3Q96P50 834 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 TMEM117Q9H0C3 514 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 C11orf49Q9H6J7 331 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
LMNA-203ENST00000368297 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 ERVK-5Q9HDB9 667 aa17.22■□□□□ 0.35
LMNA-203ENST00000368297 RBAK-RBAKDNI3L0D1 243 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 P4HA2O15460 535 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 IL18RAPO95256 599 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 GYPCP04921 128 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 COL6A1P12109 1028 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 SLC9A1P19634 815 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 CASP14P31944 242 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 KRT39Q6A163 491 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 LRRC8DQ7L1W4 858 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.35
LMNA-203ENST00000368297 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 PAWRQ96IZ0 340 aaKnown RBP17.21■□□□□ 0.35
LMNA-203ENST00000368297 APOL6Q9BWW8 343 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 PADI3Q9ULW8 664 aa17.21■□□□□ 0.35
LMNA-203ENST00000368297 MFAP3LO75121 409 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 SELPP16109 830 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 PON1P27169 355 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 BIRC3Q13489 604 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 UBXN11Q5T124 520 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 ANKRD33Q7Z3H0 272 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 INTS2Q9H0H0 1204 aaKnown RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 CHST12Q9NRB3 414 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 SNTG2Q9NY99 539 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 ATP11BQ9Y2G3 1177 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 SQORQ9Y6N5 450 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 ZSCAN12O43309 604 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 ACTN1P12814 892 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 CAPN2P17655 700 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.345e-7■■■■□ 19.8
LMNA-203ENST00000368297 YARSP54577 528 aaKnown RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 CLDN10P78369 228 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 POU5F1Q01860 360 aaKnown RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 TLE2Q04725 743 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 TSR1Q2NL82 804 aaKnown RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 SV2AQ7L0J3 742 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 CACNA2D4Q7Z3S7 1137 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 WDR49Q8IV35 697 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 EHBP1Q8NDI1 1231 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 FAM84AQ96KN4 292 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 NXF3Q9H4D5 531 aaKnown RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 LUC7L2Q9Y383 392 aaKnown RBP17.2■□□□□ 0.34
LMNA-203ENST00000368297 HES2Q9Y543 173 aa17.2■□□□□ 0.34
LMNA-203ENST00000368297 PTPRJQ12913 1337 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 ANK1P16157 1881 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 TTC26A0AVF1 554 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 LACTBL1A8MY62 500 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
LMNA-203ENST00000368297 PHACTR2O75167 634 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 AP3M2P53677 418 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 TFAMQ00059 246 aaKnown RBP17.19■□□□□ 0.34
LMNA-203ENST00000368297 APBA1Q02410 837 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 EPC2Q52LR7 807 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 FIGNQ5HY92 759 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 TRAF7Q6Q0C0 670 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 CAPN11Q9UMQ6 739 aa17.19■□□□□ 0.34
LMNA-203ENST00000368297 EPHB6O15197 1021 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 PMM2O15305 246 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 TUBB4AP04350 444 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 TMEM191BP0C7N4 346 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 KRT9P35527 623 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 POLR2FP61218 127 aaKnown RBP17.18■□□□□ 0.34
LMNA-203ENST00000368297 PTPN14Q15678 1187 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 SLC10A6Q3KNW5 377 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 TRIM65Q6PJ69 517 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 NECAB2Q7Z6G3 386 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 FBXL13Q8NEE6 735 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 ZNF397Q8NF99 534 aaPredicted RBP17.18■□□□□ 0.34
LMNA-203ENST00000368297 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 ANKRD36BP1Q96IX9 119 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 TOX2Q96NM4 488 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 TTYH3Q9C0H2 523 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 PLCB1Q9NQ66 1216 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 IPPQ9Y573 584 aa17.18■□□□□ 0.34
LMNA-203ENST00000368297 A0A1W2PQJ5 194 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms