RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 FAM193BQ96PV7 902 aaPredicted RBP16.07■□□□□ 0.16
SF3B5-201ENST00000367569 FIZ1Q96SL8 496 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 PAAF1Q9BRP4 392 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 VN1R3Q9BXE9 311 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 HAPLN2Q9GZV7 340 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 TMEM134Q9H6X4 195 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 C17orf75Q9HAS0 396 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 PLXNA3P51805 1871 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 CASTOR2A6NHX0 329 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 PTGESO14684 152 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 POLR2DO15514 142 aaKnown RBP16.06■□□□□ 0.16
SF3B5-201ENST00000367569 GALTP07902 379 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
SF3B5-201ENST00000367569 ALDH7A1P49419 539 aaKnown RBP16.06■□□□□ 0.16
SF3B5-201ENST00000367569 MPZL3Q6UWV2 235 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 MRPL43Q8N983 215 aaKnown RBP16.06■□□□□ 0.16
SF3B5-201ENST00000367569 GSTCDQ8NEC7 633 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 TMEM169Q96HH4 297 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 MARCH5Q9NX47 278 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 RCOR1Q9UKL0 485 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 GIT1Q9Y2X7 761 aa16.06■□□□□ 0.16
SF3B5-201ENST00000367569 RBM19Q9Y4C8 960 aaKnown RBP16.06■□□□□ 0.16
SF3B5-201ENST00000367569 A0A1B0GVL5 298 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 C2orf71A6NGG8 1288 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 NRP1O14786 923 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
SF3B5-201ENST00000367569 SRGAP2BP0DMP2 458 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 MYBP10242 640 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 PFKFB1P16118 471 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 LIG4P49917 911 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 CASP5P51878 434 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
SF3B5-201ENST00000367569 NOLC1Q14978 699 aaKnown RBP eCLIP16.05■□□□□ 0.16
SF3B5-201ENST00000367569 ZBTB41Q5SVQ8 909 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 TRIM67Q6ZTA4 783 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 COLGALT2Q8IYK4 626 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 B3GALT6Q96L58 329 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 GOLGA2P5Q9HBQ8 144 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 PTPRHQ9HD43 1115 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 CDH22Q9UJ99 828 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 TBX20Q9UMR3 447 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 VWA8A3KMH1 1905 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 ZDBF2Q9HCK1 2354 aa16.05■□□□□ 0.16
SF3B5-201ENST00000367569 MEFVO15553 781 aaPredicted RBP16.04■□□□□ 0.16
SF3B5-201ENST00000367569 PROZP22891 400 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 TNFSF9P41273 254 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 AFMP43652 599 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 ASIC1P78348 528 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 ZXDAP98168 799 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 KCNA1Q09470 495 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 GRIK3Q13003 919 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 ATL3Q6DD88 541 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 SLC39A4Q6P5W5 647 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 IGSF21Q96ID5 467 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 MFSD14AQ96MC6 490 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 FBXL18Q96ME1 805 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
SF3B5-201ENST00000367569 UBN1Q9NPG3 1134 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 SERTAD1Q9UHV2 236 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 HCFC2Q9Y5Z7 792 aa16.04■□□□□ 0.16
SF3B5-201ENST00000367569 ANKRD63C9JTQ0 380 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 TULP1O00294 542 aaPredicted RBP16.03■□□□□ 0.16
SF3B5-201ENST00000367569 INPPL1O15357 1258 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 CLASP2O75122 1294 aaKnown RBP16.03■□□□□ 0.16
SF3B5-201ENST00000367569 GCNT3O95395 438 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 CXCL14O95715 111 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 CXCL8P10145 99 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 HOXB8P17481 243 aaPredicted RBP16.03■□□□□ 0.16
SF3B5-201ENST00000367569 IGFBP6P24592 240 aaPredicted RBP16.03■□□□□ 0.16
SF3B5-201ENST00000367569 GRM5P41594 1212 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 SPAG1Q07617 926 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 DSC1Q08554 894 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 VPS52Q8N1B4 723 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 CASP10Q92851 521 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
SF3B5-201ENST00000367569 CCDC94Q9BW85 323 aaPredicted RBP16.03■□□□□ 0.16
SF3B5-201ENST00000367569 ZBP1Q9H171 429 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 FAN1Q9Y2M0 1017 aa16.03■□□□□ 0.16
SF3B5-201ENST00000367569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.02■□□□□ 0.16
SF3B5-201ENST00000367569 TMEM221A6NGB7 291 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 M0R296 226 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 C2CD2LO14523 706 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 TOM1L1O75674 476 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 MCF2P10911 925 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 BMP8AQ7Z5Y6 402 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 ALYREFQ86V81 257 aaKnown RBP16.02■□□□□ 0.16
SF3B5-201ENST00000367569 MAP4K3Q8IVH8 894 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 FSIP1Q8NA03 581 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 IQUBQ8NA54 791 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms