RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 RSPH10BP0C881 870 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 COPB2P35606 906 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 RAB14P61106 215 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 DSG1Q02413 1049 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 GPR162Q16538 588 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 DGKHQ86XP1 1220 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 DCAF4Q8WV16 495 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 DNAJC9Q8WXX5 260 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 PIK3R5Q8WYR1 880 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 TOPORSQ9NS56 1045 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-208ENST00000367256 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.7□□□□□ -1.18
SYNE1-208ENST00000367256 A2ML1A8K2U0 1454 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 ADORA2BP29275 332 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 CDC27P30260 824 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 COASYQ13057 564 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 ZNF235Q14590 738 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 TRPM8Q7Z2W7 1104 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 DHX40Q8IX18 779 aaKnown RBP7.7□□□□□ -1.18
SYNE1-208ENST00000367256 TRIM62Q9BVG3 475 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 UNC45AQ9H3U1 944 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 AP4S1Q9Y587 144 aa7.7□□□□□ -1.18
SYNE1-208ENST00000367256 KRT17Q04695 432 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 AASDHQ4L235 1098 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 MDH1BQ5I0G3 518 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 HDDC2Q7Z4H3 204 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ELOA2Q8IYF1 753 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 DDI1Q8WTU0 396 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ZFYVE16Q7Z3T8 1539 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SRP72O76094 671 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 KLHL2O95198 593 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 LSP1P33241 339 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SPDYAQ5MJ70 313 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 PIGOQ8TEQ8 1089 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 COA7Q96BR5 231 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 TSPAN17Q96FV3 270 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ZNF341Q9BYN7 854 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 HPS4Q9NQG7 708 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ARSEP51690 589 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 HPCAP84074 193 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SCN4BQ8IWT1 228 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 MCPH1Q8NEM0 835 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 WDR48Q8TAF3 677 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 POLR3FQ9H1D9 316 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SERPINB13Q9UIV8 391 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 FARP1Q9Y4F1 1045 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SSU72P8A0A1W2PR75 194 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 UBA6A0AVT1 1052 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 FAM47DPA6NHR8 397 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 GOLGA8RI6L899 631 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SLC16A3O15427 465 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 NCAPHQ15003 741 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 TRIM71Q2Q1W2 868 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ZNF568Q3ZCX4 644 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 CCDC137Q6PK04 289 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 RHPN2Q8IUC4 686 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 DTX3LQ8TDB6 740 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SLC7A5P2Q9GIP4 190 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 BRD8Q9H0E9 1235 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 RANBP17Q9H2T7 1088 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 CCT8L1PA6NM43 557 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SUPT3HB4E1H0 165 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 CDC25AP30304 524 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 GNA15P30679 374 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ACCSLQ4AC99 568 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 STAG2Q8N3U4 1231 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 RAD54LQ92698 747 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 NDEL1Q9GZM8 345 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 APBA3O96018 575 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 TYK2P29597 1187 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 TSGA10IPQ3SY00 556 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 IYDQ6PHW0 289 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 RHOT1Q8IXI2 618 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SLC44A4Q53GD3 710 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 TWF2Q6IBS0 349 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 SNX31Q8N9S9 440 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 DCUN1D1Q96GG9 259 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 C11orf70Q9BRQ4 267 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 FRMD8Q9BZ67 464 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 BHMT2Q9H2M3 363 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 M0R3G1 203 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 DPYSL4O14531 572 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 GUCA1CO95843 209 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 PPP3CCP48454 512 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 GCLMP48507 274 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 PRELPP51888 382 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 PLOD1Q02809 727 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 LRRC14Q15048 493 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 CLEC4FQ8N1N0 589 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 PRPF18Q99633 342 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 ALG13Q9NP73 1137 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 TLR7Q9NYK1 1049 aaKnown RBP7.69□□□□□ -1.18
SYNE1-208ENST00000367256 NEO1Q92859 1461 aa7.69□□□□□ -1.18
SYNE1-208ENST00000367256 A0A1B0GTH6 734 aa7.68□□□□□ -1.18
SYNE1-208ENST00000367256 NNMTP40261 264 aa7.68□□□□□ -1.18
SYNE1-208ENST00000367256 MTMR1Q13613 665 aa7.68□□□□□ -1.18
SYNE1-208ENST00000367256 P3H1Q32P28 736 aa7.68□□□□□ -1.18
SYNE1-208ENST00000367256 RABGAP1LQ5R372 815 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms