RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 VTNP04004 478 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 FKBP1AP62942 108 aaKnown RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 TMED2Q15363 201 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 UNC45AQ9H3U1 944 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 SH3BP1Q9Y3L3 701 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 RSPH10B2B2RC85 870 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 RSPH10BP0C881 870 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 CUL1Q13616 776 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 G3BP2Q9UN86 482 aaKnown RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 ARP10275 920 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 C15orf52Q6ZUT6 534 aaKnown RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 SYTL5Q8TDW5 730 aaPredicted RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 FAM49BQ9NUQ9 324 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 SLCO1A2P46721 670 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 ALDH1A3P47895 512 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 RASSF2P50749 326 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 PTPAQ15257 358 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 TMC7Q7Z402 723 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 SPATA24Q86W54 205 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 SH3KBP1Q96B97 665 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 FAF2Q96CS3 445 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 TRIM62Q9BVG3 475 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 STK33Q9BYT3 514 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 LRRC4BQ9NT99 713 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 MANSC4A6NHS7 340 aaPredicted RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 NFIBO00712 420 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 GAS2O43903 313 aaKnown RBP12.29□□□□□ -0.44
SYNE1-204ENST00000367248 UCHL3P15374 230 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 WEE1P30291 646 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 VGLL2Q8N8G2 317 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
SYNE1-204ENST00000367248 IL1RL1Q01638 556 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 ZNF211Q13398 564 aaPredicted RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 GLE1Q53GS7 698 aaKnown RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 ARL4CP56559 192 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 GRB10Q13322 594 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 TRIM42Q8IWZ5 723 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 RBBP8NLQ8NC74 664 aaPredicted RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 SLC38A7Q9NVC3 462 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 LSM7Q9UK45 103 aaKnown RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 NVLO15381 856 aaKnown RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 DSG3P32926 999 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 TMCO4Q5TGY1 634 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 ANGPTL8Q6UXH0 198 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 CD4P01730 458 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 KRT3P12035 628 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 AP1B1Q10567 949 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
SYNE1-204ENST00000367248 AAASQ9NRG9 546 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 IL18RAPO95256 599 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 HLA-DRAP01903 254 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 CLCN3P51790 818 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 HERVK_113P62684 666 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 CDK17Q00537 523 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 NTRK3Q16288 839 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 SPOPLQ6IQ16 392 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 MAP3K7O43318 606 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 MUTP22033 750 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 C10orf67Q8IYJ2 551 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 ENGASEQ8NFI3 743 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 C18orf8Q96DM3 657 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 WDR35Q9P2L0 1181 aa12.28□□□□□ -0.44
SYNE1-204ENST00000367248 P4HA2O15460 535 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 SH2D4BQ5SQS7 431 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 TAS2R42Q7RTR8 314 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 SENP7Q9BQF6 1050 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 HMX1Q9NP08 348 aaPredicted RBP12.27□□□□□ -0.44
SYNE1-204ENST00000367248 BCAP29Q9UHQ4 241 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 SSU72P8A0A1W2PR75 194 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 TM4SF1P30408 202 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 TBK1Q9UHD2 729 aa12.27□□□□□ -0.44
SYNE1-204ENST00000367248 AGRPO00253 132 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 SPTLC1O15269 473 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 TAP1Q03518 808 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 SHCBP1Q8NEM2 672 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 SPATC1LQ9H0A9 340 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 MID2Q9UJV3 735 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 NFU1Q9UMS0 254 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 NCK2O43639 380 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 EIF3BP55884 814 aaKnown RBP12.27□□□□□ -0.45
SYNE1-204ENST00000367248 ZNF484Q5JVG2 852 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 ELOA2Q8IYF1 753 aaPredicted RBP12.27□□□□□ -0.45
SYNE1-204ENST00000367248 SNX19Q92543 992 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 PARVAQ9NVD7 372 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 PI4K2BG5E9Z4 385 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 MED24O75448 989 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 GRAP2O75791 330 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms