RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZC3H18Q86VM9 953 aaKnown RBP16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 MYCBPQ99417 103 aaPredicted RBP16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 SLC13A1Q9BZW2 595 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 AGAP1Q9UPQ3 857 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 MEFVO15553 781 aaPredicted RBP16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 HAUS6Q7Z4H7 955 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 BTN2A2Q8WVV5 523 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 PSD3Q9NYI0 1048 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 ANO9A1A5B4 782 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 TMEM132DQ14C87 1099 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 CCDC85BQ15834 202 aaPredicted RBP16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 KDELC2Q7Z4H8 507 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 ZSCAN32Q9NX65 697 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 TRAF3IP3Q9Y228 551 aa16.56■□□□□ 0.24
NUCKS1-201ENST00000367142 EMSYQ7Z589 1322 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 ANGPT2O15123 496 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 SLC1A1P43005 524 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 SREBF2Q12772 1141 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 SFSWAPQ12872 951 aaKnown RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 SPDYAQ5MJ70 313 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 SNX31Q8N9S9 440 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 MTA3Q9BTC8 594 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 AAASQ9NRG9 546 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 TMEM161AQ9NX61 479 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 ZFATQ9P243 1243 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 FAM32AQ9Y421 112 aaKnown RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 RARBP10826 455 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 RPAINQ86UA6 219 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 KIRREL3Q8IZU9 778 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 NMT2O60551 498 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 EIF3EP60228 445 aaKnown RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 COG1Q8WTW3 980 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 DNAJC7Q99615 494 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.243e-25■□□□□ 10.3
NUCKS1-201ENST00000367142 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 CFAP99D6REC4 459 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 CCDC22O60826 627 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 NDUFS3O75489 264 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 PSMA3P25788 255 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 KRT17Q04695 432 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 SLC44A5Q8NCS7 719 aa16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 NOP53Q9NZM5 478 aaKnown RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 EIF3DO15371 548 aaKnown RBP eCLIP16.55■□□□□ 0.242e-24■■□□□ 11.6
NUCKS1-201ENST00000367142 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
NUCKS1-201ENST00000367142 HPCAP84074 193 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 ZNF211Q13398 564 aaPredicted RBP16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 IZUMO3Q5VZ72 239 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 NDEL1Q9GZM8 345 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 MAGEB2O15479 319 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 EYA4O95677 639 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 GSNP06396 782 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 CUL4AQ13619 759 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 DMC1Q14565 340 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 SV2CQ496J9 727 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 STN1Q9H668 368 aaKnown RBP16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 PRCPP42785 496 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 KIZQ2M2Z5 673 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 GLB1LQ6UWU2 654 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 ARHGEF38Q9NXL2 777 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 INPP5AQ14642 412 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 XKR3Q5GH77 459 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 E4F1Q66K89 784 aaPredicted RBP16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 BRINP3Q76B58 766 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 UNC45AQ9H3U1 944 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 ANO5Q75V66 913 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 CYB5R4Q7L1T6 521 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 WDR35Q9P2L0 1181 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 FBXL5Q9UKA1 691 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 PKP3Q9Y446 797 aa16.54■□□□□ 0.24
NUCKS1-201ENST00000367142 LRRIQ3A6PVS8 624 aaPredicted RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 PJA2O43164 708 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 CYP2C19P33261 490 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 ALDH1A3P47895 512 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 SLC9A5Q14940 896 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 MTFR1Q15390 333 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 SMAD1Q15797 465 aaKnown RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 WDR72Q3MJ13 1102 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 EEF2KO00418 725 aaKnown RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 KCNN4O15554 427 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 KRT16P08779 473 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 MGAT5BQ3V5L5 792 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 TRIM48Q8IWZ4 208 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 CEP70Q8NHQ1 597 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 KRT35Q92764 455 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 ELMO2Q96JJ3 720 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 ZMAT2Q96NC0 199 aaKnown RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 TGS1Q96RS0 853 aaKnown RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 SYNMO15061 1565 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms