RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 WRAP73Q9P2S5 460 aaPredicted RBP8.74□□□□□ -1.01
CD46-208ENST00000367042 HAO1Q9UJM8 370 aa8.74□□□□□ -1.01
CD46-208ENST00000367042 USP21Q9UK80 565 aa8.74□□□□□ -1.01
CD46-208ENST00000367042 PRR12Q9ULL5 1215 aa8.74□□□□□ -1.01
CD46-208ENST00000367042 GOLGA8SH3BPF8 625 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 GOLGA8MH3BSY2 632 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 IPO5O00410 1097 aaKnown RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 SORBS3O60504 671 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 PIAS1O75925 651 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CD58P19256 250 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CA4P22748 312 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 ECE1P42892 770 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 STAT2P52630 851 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 DRG2P55039 364 aaKnown RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 KIF22Q14807 665 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CAPRIN2Q6IMN6 1127 aaKnown RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 CBWD2Q8IUF1 395 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CYP4X1Q8N118 509 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 SPOCK2Q92563 424 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 TMEM117Q9H0C3 514 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 SAYSD1Q9NPB0 183 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.73□□□□□ -1.013e-6■■■□□ 15.7
CD46-208ENST00000367042 ZNF148Q9UQR1 794 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 PI4K2BG5E9Z4 385 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 GGPS1O95749 300 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 TTC4O95801 387 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CCND1P24385 295 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CTNNA2P26232 953 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CEP55Q53EZ4 464 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 SPDYCQ5MJ68 293 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 HHATQ5VTY9 493 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 IZUMO3Q5VZ72 239 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 MOXD1Q6UVY6 613 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 CYFIP1Q7L576 1253 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 NT5C1BQ96P26 610 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 SERPINB12Q96P63 405 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 LRRC37BQ96QE4 947 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 ACCSQ96QU6 501 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 HSD17B14Q9BPX1 270 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 PPP1R12CQ9BZL4 782 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 ROPN1BQ9BZX4 212 aaPredicted RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 COA1Q9GZY4 146 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 TDRD3Q9H7E2 651 aaKnown RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 ROPN1Q9HAT0 212 aaPredicted RBP8.73□□□□□ -1.01
CD46-208ENST00000367042 TUFT1Q9NNX1 390 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 DCTN4Q9UJW0 460 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 NAALADL1Q9UQQ1 740 aa8.73□□□□□ -1.01
CD46-208ENST00000367042 RALAP11233 206 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ALDH3A1P30838 453 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 RAD23BP54727 409 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 VSTM1Q6UX27 236 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 TMEM179Q6ZVK1 233 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 BZW1Q7L1Q6 419 aaKnown RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 ANKRD35Q8N283 1001 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 LRRC8CQ8TDW0 803 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 GRK7Q8WTQ7 553 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 RAB3IPQ96QF0 476 aaPredicted RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 RPS6KC1Q96S38 1066 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 CSRNP1Q96S65 589 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 KIF9Q9HAQ2 790 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 RXFP1Q9HBX9 757 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ALG13Q9NP73 1137 aaKnown RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 SLCO1B3Q9NPD5 702 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 SEL1LQ9UBV2 794 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 NENFQ9UMX5 172 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 MYCLP12524 364 aaPredicted RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 CYP11B1P15538 503 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 PEX5P50542 639 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ZBTB16Q05516 673 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 MPP2Q14168 576 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ANKRD20A2Q5SQ80 823 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ANKRD20A1Q5TYW2 823 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ANKRD20A3Q5VUR7 823 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 APOBEC3HQ6NTF7 200 aaKnown RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 HAUS6Q7Z4H7 955 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 POMGNT1Q8WZA1 660 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 RBM15Q96T37 977 aaKnown RBP eCLIP8.72□□□□□ -1.012e-10■■■■□ 23.5
CD46-208ENST00000367042 C11orf70Q9BRQ4 267 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 TMEM206Q9H813 350 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 EHMT1Q9H9B1 1298 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 DDX60LQ5H9U9 1706 aaKnown RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 TCP10L2B9ZVM9 353 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 CDH16O75309 829 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ITIH2P19823 946 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 NSFP46459 744 aaKnown RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 NOVP48745 357 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 XKR9Q5GH70 373 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 PPP1R21Q6ZMI0 780 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 MAGEC3Q8TD91 643 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 WDR11Q9BZH6 1224 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 ARHGEF10LQ9HCE6 1279 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 NINJ2Q9NZG7 142 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 NYAP2Q9P242 653 aa8.72□□□□□ -1.01
CD46-208ENST00000367042 R3HDM2Q9Y2K5 976 aaKnown RBP8.72□□□□□ -1.01
CD46-208ENST00000367042 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms