RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 CCDC89Q8N998 374 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 GIPC3Q8TF64 312 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 LARP4BQ92615 738 aaKnown RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 MARCOQ9UEW3 520 aaPredicted RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 GFPT2O94808 682 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 KLK7P49862 253 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 EXOC3L4Q17RC7 722 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 STXBP4Q6ZWJ1 553 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 DHTKD1Q96HY7 919 aaPredicted RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 PIDD1Q9HB75 910 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 SELENONQ9NZV5 590 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 RNF103-CHMP3A0A140T963 221 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 TAF4O00268 1085 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 SERPINI2O75830 405 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 ADAM9Q13443 819 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 RARS2Q5T160 578 aaKnown RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 TSHZ1Q6ZSZ6 1077 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 CAPSLQ8WWF8 208 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 SHCBP1LQ9BZQ2 653 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 CCDC90BQ9GZT6 254 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 SAYSD1Q9NPB0 183 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 KCND1Q9NSA2 647 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 LMCD1Q9NZU5 365 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 FBXO9Q9UK97 447 aaPredicted RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 TRIM64CA6NLI5 447 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 CLCN2P51788 898 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 IL1RL1Q01638 556 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 SP4Q02446 784 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRKN-206ENST00000366898 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 MSL3Q8N5Y2 521 aaKnown RBP12.4□□□□□ -0.42
PRKN-206ENST00000366898 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 C9orf72Q96LT7 481 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 RNPEPQ9H4A4 650 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 RABL2BQ9UNT1 228 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 GRID2IPA4D2P6 1211 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 E9PMD0 336 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 NDUFB5O43674 189 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 STRNO43815 780 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 YY1P25490 414 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 RCAN1P53805 252 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 ALDH18A1P54886 795 aaKnown RBP12.4□□□□□ -0.42
PRKN-206ENST00000366898 SLC34A1Q06495 639 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 STK4Q13043 487 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
PRKN-206ENST00000366898 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 RUBCNQ92622 972 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 PLEKHG4BQ96PX9 1271 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 THAP9Q9H5L6 903 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 RXFP1Q9HBX9 757 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 COMMD3-BMI1R4GMX3 469 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 CCDC195A0A1B0GUA6 201 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 TCP10L2B9ZVM9 353 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 SERPINB1P30740 379 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
PRKN-206ENST00000366898 ZC3H12AQ5D1E8 599 aaKnown RBP12.4□□□□□ -0.42
PRKN-206ENST00000366898 SLFN13Q68D06 897 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 GLG1Q92896 1179 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
PRKN-206ENST00000366898 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 BRD8Q9H0E9 1235 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
PRKN-206ENST00000366898 PODXLO00592 558 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 LRRN2O75325 713 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 FAM13AO94988 1023 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 VAV1P15498 845 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.43
PRKN-206ENST00000366898 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.43
PRKN-206ENST00000366898 ZNF844Q08AG5 666 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 ART3Q13508 389 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 VPS72Q15906 364 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 KYNUQ16719 465 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.43
PRKN-206ENST00000366898 ERMNQ8TAM6 284 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 CALML6Q8TD86 181 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 CAVIN3Q969G5 261 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 ZNF184Q99676 751 aaPredicted RBP12.4□□□□□ -0.43
PRKN-206ENST00000366898 SNX25Q9H3E2 840 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.43
PRKN-206ENST00000366898 CYTH3O43739 400 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 RPS6P62753 249 aaKnown RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 TTC8Q8TAM2 541 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms