RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 DOCK8Q8NF50 2099 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 COL4A3Q01955 1670 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 MYMKA6NI61 221 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 USO1O60763 962 aaKnown RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 ZC3H11AO75152 810 aaKnown RBP eCLIP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 OFD1O75665 1012 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 MBD3O95983 291 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 SSBP05455 408 aaKnown RBP eCLIP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 SLFN14P0C7P3 912 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 CTSAP10619 480 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 CYP11B2P19099 503 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 HOXA11P31270 313 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 AFMP43652 599 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 ATXN1P54253 815 aaKnown RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 RAD51AP2Q09MP3 1159 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 XKR9Q5GH70 373 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 UBXN11Q5T124 520 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 GPBP1Q86WP2 473 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 ZNF280BQ86YH2 543 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 CNNM3Q8NE01 707 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 ST13P5Q8NFI4 369 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 TMEM143Q96AN5 459 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 PAGE5Q96GU1 130 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 CEP170P1Q96L14 293 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 NLRP4Q96MN2 994 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 SCLT1Q96NL6 688 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 NACC1Q96RE7 527 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 GCOM2Q9BZD3 368 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 BLZF1Q9H2G9 400 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 NRDE2Q9H7Z3 1164 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 POLD4Q9HCU8 107 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 XPNPEP1Q9NQW7 623 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 CHST12Q9NRB3 414 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 TBC1D13Q9NVG8 400 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 KBTBD4Q9NVX7 518 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 DLGAP2Q9P1A6 1054 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 TMEM63CQ9P1W3 806 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 WNT16Q9UBV4 365 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 RALYQ9UKM9 306 aaKnown RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 DNM3Q9UQ16 869 aa9.01□□□□□ -0.97
MRPL55-211ENST00000366738 PIN4Q9Y237 131 aaKnown RBP9.01□□□□□ -0.97
MRPL55-211ENST00000366738 PKD1L2Q7Z442 2459 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 ARHGEF35A5YM69 484 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 DKC1O60832 514 aaKnown RBP eCLIP9□□□□□ -0.97
MRPL55-211ENST00000366738 KINO60870 393 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 LRRN2O75325 713 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 DDHD2O94830 711 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 GALTP07902 379 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 MYBP10242 640 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 GLULP15104 373 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 GBP2P32456 591 aaPredicted RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 SLC11A1P49279 550 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 ALDH7A1P49419 539 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 PNOCQ13519 176 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 CUL4BQ13620 913 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 BMS1Q14692 1282 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 EMC2Q15006 297 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 PTPN14Q15678 1187 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 CAMK4Q16566 473 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 ARSHQ5FYA8 562 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 TWF2Q6IBS0 349 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 RINT1Q6NUQ1 792 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 CAVIN1Q6NZI2 390 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 PADI6Q6TGC4 694 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 AGMOQ6ZNB7 445 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 C1orf186Q6ZWK4 172 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 MAEAQ7L5Y9 396 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 DYMQ7RTS9 669 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 ZNF410Q86VK4 478 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 C1orf210Q8IVY1 113 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 CEP57L1Q8IYX8 460 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 MAML2Q8IZL2 1156 aaPredicted RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 GPR152Q8TDT2 470 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 PRPF31Q8WWY3 499 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 IGSF21Q96ID5 467 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 MRPL9Q9BYD2 267 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 FOXQ1Q9C009 403 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 TNMDQ9H2S6 317 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 CUEDC2Q9H467 287 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 CLSTN2Q9H4D0 955 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 DHX33Q9H6R0 707 aaKnown RBP9□□□□□ -0.97
MRPL55-211ENST00000366738 GPRC5CQ9NQ84 441 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 ARHGEF3Q9NR81 526 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 ANKEF1Q9NU02 776 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 FAM105AQ9NUU6 356 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 IGSF9Q9P2J2 1179 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 NCDNQ9UBB6 729 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 IRAK3Q9Y616 596 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 FRYQ5TBA9 3013 aa9□□□□□ -0.97
MRPL55-211ENST00000366738 IGF2RP11717 2491 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 DCDC2BA2VCK2 349 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 TRAK2O60296 914 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 ZNF623O75123 536 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 HIP1RO75146 1068 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 SRGAP2CP0DJJ0 459 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 SRFP11831 508 aa8.99□□□□□ -0.97
MRPL55-211ENST00000366738 SFPQP23246 707 aaKnown RBP eCLIP8.99□□□□□ -0.97
MRPL55-211ENST00000366738 DNM2P50570 870 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms