RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KMT5AQ9NQR1 393 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 MAN1C1Q9NR34 630 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 TRIP11Q15643 1979 aa15.02■□□□□ -0
TNFRSF1A-202ENST00000366159 SF3B1O75533 1304 aaKnown RBP eCLIP15.02□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SMIM28A0A1B0GU29 152 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SLC16A4O15374 487 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TGM5O43548 720 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 GLUD1P00367 558 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PLA2G4BP0C869 781 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 GRIN1Q05586 938 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 UPP1Q16831 310 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TMEM132AQ24JP5 1023 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RIN2Q8WYP3 895 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PIK3R5Q8WYR1 880 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZNF707Q96C28 371 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MFSD14AQ96MC6 490 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PLIN2Q99541 437 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CLSTN3Q9BQT9 956 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MRPL4Q9BYD3 311 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 KCNH6Q9H252 994 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PLEKHA4Q9H4M7 779 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 KCNG1Q9UIX4 513 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 VWA8A3KMH1 1905 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MYO10Q9HD67 2058 aa15.01□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CCDC195A0A1B0GUA6 201 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MCF2P10911 925 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RPL17P18621 184 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CREMQ03060 361 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SOX4Q06945 474 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RAD51AP2Q09MP3 1159 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SF3A1Q15459 793 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZRSR1Q15695 479 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PRSS55Q6UWB4 352 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 APBB1IPQ7Z5R6 666 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PALB2Q86YC2 1186 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 HASPINQ8TF76 798 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FAM122AQ96E09 287 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZBTB45Q96K62 511 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZMAT2Q96NC0 199 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TTPALQ9BTX7 342 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 DPP7Q9UHL4 492 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SORCS3Q9UPU3 1222 aa15□□□□□ -0.01
TNFRSF1A-202ENST00000366159 NPHP3-ACAD11A0A0J9YXS1 232 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 N4BP1O75113 896 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TOM1L1O75674 476 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RFPL2O75678 378 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 BMP15O95972 392 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 KCNE1P15382 129 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 LONP1P36776 959 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CLCNKBP51801 687 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZNF131P52739 623 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 NCKAP1LP55160 1127 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PTPAQ15257 358 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZNF568Q3ZCX4 644 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 GLRA4Q5JXX5 417 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FAM171A1Q5VUB5 890 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MPZL3Q6UWV2 235 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TDRD5Q8NAT2 981 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 KREMEN2Q8NCW0 462 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 C3orf58Q8NDZ4 430 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PBXIP1Q96AQ6 731 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 UROC1Q96N76 676 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 HAPLN2Q9GZV7 340 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 WDR6Q9NNW5 1121 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CNTN3Q9P232 1028 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MYH11P35749 1972 aa14.99□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FGFR3P22607 806 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ELAVL2Q12926 359 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MTMR3Q13615 1198 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZPBP2Q6X784 338 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CCDC149Q6ZUS6 474 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 UBALD2Q8IYN6 164 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 INTS4Q96HW7 963 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SNX27Q96L92 541 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FIZ1Q96SL8 496 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CCSER1Q9C0I3 900 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 GOLGA2P5Q9HBQ8 144 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TOPORSQ9NS56 1045 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZDHHC7Q9NXF8 308 aa14.98□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ADAM12O43184 909 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 B3GAT3O94766 335 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ASGR2P07307 311 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PDCP20941 246 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SYT1P21579 422 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 UBA7P41226 1012 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SMTNP53814 917 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 OSTNP61366 133 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms