RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HMGA2P52926 109 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 CLRN1P58418 232 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 ABHD18Q0P651 414 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 MGAT2Q10469 447 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 PTPROQ16827 1216 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 METTL24Q5JXM2 366 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 ATXN7L2Q5T6C5 722 aaPredicted RBP6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 USP51Q70EK9 711 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZNF627Q7L945 461 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 RHOT1Q8IXI2 618 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 NEU1Q99519 415 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 PCED1AQ9H1Q7 454 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 SLC23A1Q9UHI7 598 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 LPXNO60711 386 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 NCR1O76036 304 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 RECQL4O94761 1208 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 GUCY1A2P33402 732 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 MCM7P33993 719 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 FHL2Q14192 279 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 PDCD4Q53EL6 469 aaKnown RBP6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 METRNLQ641Q3 311 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 MED25Q71SY5 747 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 UBE3BQ7Z3V4 1068 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZFP28Q8NHY6 868 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 LANCL2Q9NS86 450 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 LIMCH1Q9UPQ0 1083 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 MAP3K2Q9Y2U5 619 aa6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 USP15Q9Y4E8 981 aaPredicted RBP6.1□□□□□ -1.43
RNU4-28P-201ENST00000364739 MYBBP1AQ9BQG0 1328 aaKnown RBP6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 ALG1L2C9J202 215 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 CYR61O00622 381 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 ENDOD1O94919 500 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 PRSS23O95084 383 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 IL2RBP14784 551 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 MAKP20794 623 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 SLC6A2P23975 617 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 SP140Q13342 867 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 IL10RAQ13651 578 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 FAM102AQ5T9C2 384 aaPredicted RBP6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 DRICH1Q6PGQ1 229 aaPredicted RBP6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 GDF7Q7Z4P5 450 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 MRGPREQ86SM8 312 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 PNMA8AQ86V59 439 aaPredicted RBP6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 HAS1Q92839 578 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 TEKT5Q96M29 485 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 C7orf25Q9BPX7 421 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 MRIQ9BWK5 157 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 ASPSCR1Q9BZE9 553 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 SERPINB13Q9UIV8 391 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 CHST2Q9Y4C5 530 aa6.09□□□□□ -1.43
RNU4-28P-201ENST00000364739 TCRBV7S2A1N4TA0A589 114 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 TRIM24O15164 1050 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 NDUFA10O95299 355 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 SNRPA1P09661 255 aaKnown RBP6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 ZSCAN20P17040 1043 aaPredicted RBP6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 ATP5JP18859 108 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 EDNRBP24530 442 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 KIF23Q02241 960 aaPredicted RBP6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 C3orf36Q3SXR2 165 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 BRDTQ58F21 947 aaPredicted RBP6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 RRP12Q5JTH9 1297 aaKnown RBP6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 ZNF529Q6P280 563 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 VRK3Q8IV63 474 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 AKIP1Q9NQ31 210 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 HOMER2Q9NSB8 354 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 TMEM140Q9NV12 185 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 FBXO34Q9NWN3 711 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 CLCA2Q9UQC9 943 aa6.08□□□□□ -1.44
RNU4-28P-201ENST00000364739 PJA2O43164 708 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 GPR32O75388 356 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 PEX11BO96011 259 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 ADH4P08319 380 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 DDCP20711 480 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 CCND1P24385 295 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 MTM1Q13496 603 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 UBXN2BQ14CS0 331 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 TSHZ3Q63HK5 1081 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 RPUSD2Q8IZ73 545 aaKnown RBP6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 KAT5Q92993 513 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 DCLRE1CQ96SD1 692 aaKnown RBP6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 MOCS1Q9NZB8 636 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 ANKFY1Q9P2R3 1169 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 IPPQ9Y573 584 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 MRFAP1Q9Y605 127 aa6.07□□□□□ -1.44
RNU4-28P-201ENST00000364739 CCDC78A2IDD5 438 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 CCDC154A6NI56 674 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 FAM171A2A8MVW0 826 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 HTRA2O43464 458 aaPredicted RBP6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 ITGB1P05556 798 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 KRT4P19013 534 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 MGAT1P26572 445 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 PTGS2P35354 604 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 ATP8B2P98198 1209 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 TARDBPQ13148 414 aaKnown RBP eCLIP6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 TIGD2Q4W5G0 525 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 EFCAB2Q5VUJ9 269 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 Q6ZPA2 131 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms