RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 REXO4Q9GZR2 422 aaKnown RBP3.41□□□□□ -1.86
RNU4-42P-201ENST00000364738 TOPORSQ9NS56 1045 aaPredicted RBP3.41□□□□□ -1.86
RNU4-42P-201ENST00000364738 KLHL11Q9NVR0 708 aa3.41□□□□□ -1.86
RNU4-42P-201ENST00000364738 DPP7Q9UHL4 492 aa3.41□□□□□ -1.86
RNU4-42P-201ENST00000364738 TLK1Q9UKI8 766 aa3.41□□□□□ -1.86
RNU4-42P-201ENST00000364738 MAST3O60307 1309 aa3.41□□□□□ -1.86
RNU4-42P-201ENST00000364738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 PDE8AO60658 829 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 C1RP00736 705 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ENPP1P22413 925 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ECHS1P30084 290 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 MPLP40238 635 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ELLP55199 621 aaPredicted RBP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 CCT2P78371 535 aaKnown RBP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 CDK17Q00537 523 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 SCAPQ12770 1279 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 TSHZ3Q63HK5 1081 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZNF572Q7Z3I7 529 aaPredicted RBP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 GPR149Q86SP6 731 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 DRC7Q8IY82 874 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 OR7D4Q8NG98 312 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 CAGE1Q8TC20 777 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 RNF31Q96EP0 1072 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 FUBP3Q96I24 572 aaKnown RBP eCLIP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 RAX2Q96IS3 184 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 Q96MF0 132 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ACAP3Q96P50 834 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 UHRF1Q96T88 793 aaPredicted RBP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZSWIM1Q9BR11 485 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 LRFN3Q9BTN0 628 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 DUSP26Q9BV47 211 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 SPATA5L1Q9BVQ7 753 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 RNPEPQ9H4A4 650 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 KIAA1586Q9HCI6 787 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 NOX1Q9Y5S8 564 aa3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 MRPL42Q9Y6G3 142 aaKnown RBP3.4□□□□□ -1.87
RNU4-42P-201ENST00000364738 ELANEP08246 267 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 RAP2AP10114 183 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 MYCLP1P12525 358 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 ALOX15P16050 662 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 BPIP17213 487 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 ATXN1P54253 815 aaKnown RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 PER3P56645 1201 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 SESN3P58005 492 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 OCA2Q04671 838 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 GJC2Q5T442 439 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 AFMIDQ63HM1 303 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 B3GNTL1Q67FW5 361 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 SP5Q6BEB4 398 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 Q6ZNX1 250 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 TMEM132CQ8N3T6 1108 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 CLRN3Q8NCR9 226 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 RIN2Q8WYP3 895 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 IFT22Q9H7X7 185 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 BCO1Q9HAY6 547 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 TBCCD1Q9NVR7 557 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 MAPRE3Q9UPY8 281 aa3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 ARHGEF17Q96PE2 2063 aaPredicted RBP3.39□□□□□ -1.87
RNU4-42P-201ENST00000364738 ATRNL1Q5VV63 1379 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 A0A087X0B3 334 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 A0A1B0GTW7 788 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 NEMP1O14524 444 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 ULK1O75385 1050 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 ATP5JP18859 108 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 FGFR4P22455 802 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 ID4P47928 161 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 CXADRP78310 365 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 SIM1P81133 766 aaPredicted RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 SP140Q13342 867 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZNF169Q14929 603 aaPredicted RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 DHCR24Q15392 516 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 ADRM1Q16186 407 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 Q6ZVL8 140 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 KIAA0907Q7Z7F0 614 aaPredicted RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 JAZF1Q86VZ6 243 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 FAM98AQ8NCA5 519 aaKnown RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 GPR156Q8NFN8 814 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 TSPEARQ8WU66 669 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 AUTS2Q8WXX7 1259 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 NAF1Q96HR8 494 aaKnown RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 MRI1Q9BV20 369 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 SENP6Q9GZR1 1112 aaPredicted RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 QRSL1Q9H0R6 528 aaKnown RBP3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 GALNT9Q9HCQ5 603 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 CASS4Q9NQ75 786 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 MOCS1Q9NZB8 636 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 KCNE5Q9UJ90 142 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 PNPLA7Q6ZV29 1317 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 SALL3Q9BXA9 1300 aa3.38□□□□□ -1.87
RNU4-42P-201ENST00000364738 WNT10BO00744 389 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 IL2RBP14784 551 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 SREBF1P36956 1147 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 ALDH1A3P47895 512 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 HSD11B2P80365 405 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 MRPS35P82673 323 aaKnown RBP3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 MRPS9P82933 396 aaKnown RBP3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 MUM1Q2TAK8 710 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 ARHGEF25Q86VW2 580 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 PQLC1Q8N2U9 271 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms