RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 SRGAP1Q7Z6B7 1085 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 MRPL10Q7Z7H8 261 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FERMT3Q86UX7 667 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 GAS2L3Q86XJ1 694 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 POTEDQ86YR6 584 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 C1orf210Q8IVY1 113 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SMAP1Q8IYB5 467 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CCDC105Q8IYK2 499 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 TRIM22Q8IYM9 498 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 UBALD2Q8IYN6 164 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 MAML2Q8IZL2 1156 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 HS6ST3Q8IZP7 471 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 GSTCDQ8NEC7 633 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 LNX1Q8TBB1 728 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC7A14Q8TBB6 771 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ETNPPLQ8TBG4 499 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 BICD2Q8TD16 824 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CCDC12Q8WUD4 166 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 PSPC1Q8WXF1 523 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CRYGNQ8WXF5 182 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FOXD4L4Q8WXT5 416 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC7A3Q8WY07 619 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 BSNDQ8WZ55 320 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FGF13Q92913 245 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FGF14Q92915 247 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 C18orf25Q96B23 403 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZNF707Q96C28 371 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ERLEC1Q96DZ1 483 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 TCEAL4Q96EI5 215 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FAM212AQ96EL1 285 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CHAMP1Q96JM3 812 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZBTB45Q96K62 511 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FAM167AQ96KS9 214 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZSWIM3Q96MP5 696 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CNTNAP3BQ96NU0 1288 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 NECTIN4Q96NY8 510 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 PGLYRP2Q96PD5 576 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 RPS6KC1Q96S38 1066 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 RIT2Q99578 217 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 MTRQ99707 1265 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CLSTN3Q9BQT9 956 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CORO1BQ9BR76 489 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 LLPHQ9BRT6 129 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 LXNQ9BS40 222 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 TCHPQ9BT92 498 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 MTA3Q9BTC8 594 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 PHF20Q9BVI0 1012 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CNTNAP3Q9BZ76 1288 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SMG9Q9H0W8 520 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CSRNP2Q9H175 543 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 GLT8D2Q9H1C3 349 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 POLR3FQ9H1D9 316 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 RBSNQ9H1K0 784 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 KCNH6Q9H252 994 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 TMEM60Q9H2L4 133 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SMOC1Q9H4F8 434 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 TTC12Q9H892 705 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SFXN1Q9H9B4 322 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 LMAN1LQ9HAT1 526 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CYP4F11Q9HBI6 524 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZSWIM6Q9HCJ5 1215 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 WDR6Q9NNW5 1121 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 RRAGDQ9NQL2 400 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 XPNPEP1Q9NQW7 623 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 CHST12Q9NRB3 414 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 HEBP1Q9NRV9 189 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 RBM12Q9NTZ6 932 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 AGPAT5Q9NUQ2 364 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 C2orf42Q9NWW7 574 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 FAM13BQ9NYF5 915 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 KANSL3Q9P2N6 904 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 DNMT3BQ9UBC3 853 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ORC3Q9UBD5 711 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 USP25Q9UHP3 1055 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 HOOK1Q9UJC3 728 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 VAV3Q9UKW4 847 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 USP18Q9UMW8 372 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 PCDHA12Q9UN75 941 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 LZTS1Q9Y250 596 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 INVSQ9Y283 1065 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC27A5Q9Y2P5 690 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 R3HCC1Q9Y3T6 440 aaKnown RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 TIMM13Q9Y5L4 95 aaPredicted RBP1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 COL4A3BPQ9Y5P4 624 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 WDFY4Q6ZS81 3184 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 ABCA12Q86UK0 2595 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 COL1A2P08123 1366 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 KIAA1217Q5T5P2 1943 aa1.7□□□□□ -2.14
RNU1-42P-201ENST00000364033 KAT6AQ92794 2004 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 EVPLQ92817 2033 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 CLUHO75153 1309 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 ASH1LQ9NR48 2969 aaKnown RBP1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 SDK1Q7Z5N4 2213 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 SMIM28A0A1B0GU29 152 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 A0A1B0GUA9 196 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 KANSL1LA0AUZ9 987 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 ESYT2A0FGR8 921 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 ARHGEF35A5YM69 484 aa1.69□□□□□ -2.14
RNU1-42P-201ENST00000364033 PP2D1A8MPX8 630 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms