RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 VRK1Q99986 396 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CNPPD1Q9BV87 410 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 BTBD2Q9BX70 525 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 AMNQ9BXJ7 453 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OSBPL1AQ9BXW6 950 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SENP6Q9GZR1 1112 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 JMJD4Q9H9V9 463 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SACM1LQ9NTJ5 587 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MAN2B2Q9Y2E5 1009 aa4.33□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CLCA1A8K7I4 914 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 B4E171 279 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MAFO75444 373 aaPredicted RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 POLBP06746 335 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ZGLP1P0C6A0 271 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TSPAN7P41732 249 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 GALK1P51570 392 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CLNS1AP54105 237 aaKnown RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NAP1L1P55209 391 aaKnown RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 POLE2P56282 527 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CYP4F8P98187 520 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 APBA1Q02410 837 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TLE2Q04725 743 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MGAT5Q09328 741 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FSTL1Q12841 308 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SNAPC2Q13487 334 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MAN2A1Q16706 1144 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NBPF8Q3BBV2 869 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ADCK5Q3MIX3 580 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 WDR45BQ5MNZ6 344 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ANKRD45Q5TZF3 282 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CD276Q5ZPR3 534 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 JMJD6Q6NYC1 403 aaPredicted RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PDXDC1Q6P996 788 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 LRRTM4Q86VH4 590 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TMTC1Q8IUR5 882 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PLD6Q8N2A8 252 aaKnown RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OR6B3Q8NGW1 331 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PPP1R14CQ8TAE6 165 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FAM71BQ8TC56 605 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ASB12Q8WXK4 309 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 HOXB13Q92826 284 aaPredicted RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 HRASLS5Q96KN8 279 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SNX22Q96L94 193 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DBNDD2Q9BQY9 259 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PYM1Q9BRP8 204 aaKnown RBP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TMEM8AQ9HCN3 771 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NECTIN3Q9NQS3 549 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 GGA3Q9NZ52 723 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DTLQ9NZJ0 730 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 LMCD1Q9NZU5 365 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 KIF17Q9P2E2 1029 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 EBF1Q9UH73 591 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PCDHA6Q9UN73 950 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PCDHA1Q9Y5I3 950 aa4.32□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TRIM43BA6NCK2 446 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 A6NLC8 198 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 F5H0A9 414 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 IPO5O00410 1097 aaKnown RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 HOXC11O43248 304 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SRGAP3O43295 1099 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TBC1D4O60343 1298 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SOAT2O75908 522 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MT-ND5P03915 603 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CKMT1AP12532 417 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MYL4P12829 197 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SYN1P17600 705 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RPS6KB1P23443 525 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MCCP23508 829 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CTSSP25774 331 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CNTFP26441 200 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ECHS1P30084 290 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ARFIP2P53365 341 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PER3P56645 1201 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SESN2P58004 480 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FOXO4P98177 505 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TLE1Q04724 770 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TARDBPQ13148 414 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DGKDQ16760 1214 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FAM110CQ1W6H9 321 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FLYWCH1Q4VC44 716 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SLC44A4Q53GD3 710 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 C3orf38Q5JPI3 329 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FBXO38Q6PIJ6 1188 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ZNF783Q6ZMS7 281 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RNF44Q7L0R7 432 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FASTKD5Q7L8L6 764 aaKnown RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ANKRD23Q86SG2 305 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ALYREFQ86V81 257 aaKnown RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FAM129CQ86XR2 697 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SPPL3Q8TCT6 385 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 IGDCC4Q8TDY8 1250 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NUP133Q8WUM0 1156 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 IPCEF1Q8WWN9 437 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TRIM43Q96BQ3 446 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 EID2BQ96D98 161 aa4.31□□□□□ -1.72
RNU6-1249P-201ENST00000363237 C18orf8Q96DM3 657 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms