RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NAALADL1Q9UQQ1 740 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 ZNF711Q9Y462 761 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 CLDN3O15551 220 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 CALUO43852 315 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 ZBED4O75132 1171 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 STK10O94804 968 aaKnown RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 LBRQ14739 615 aaKnown RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 COG2Q14746 738 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 MTFR1Q15390 333 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 SGO2Q562F6 1265 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 CGB2Q6NT52 195 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 CYP2W1Q8TAV3 490 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 RFFLQ8WZ73 363 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 HES6Q96HZ4 224 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 C12orf65Q9H3J6 166 aaKnown RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 CLIC5Q9NZA1 410 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 MAGEA13PA6NCF6 341 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 DCTN3O75935 186 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 GNA14O95837 355 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 TAC1P20366 129 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 FYB2Q5VWT5 728 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 IZUMO2Q6UXV1 221 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 SUDS3Q9H7L9 328 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 DDX18Q9NVP1 670 aaKnown RBP13.52□□□□□ -0.25
VAMP1-201ENST00000361716 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 ANAPC5Q9UJX4 755 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 USTQ9Y2C2 406 aa13.52□□□□□ -0.25
VAMP1-201ENST00000361716 EXOC1LA0A1B0GW35 172 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 GOLGA8IPA6NC78 632 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 A6NJR5 290 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 GOLGA8JA6NMD2 632 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 PODXLO00592 558 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 TJP3O95049 919 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 GDF11O95390 407 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 CHRNA3P32297 505 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 PIK3CAP42336 1068 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 UBE2TQ9NPD8 197 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 CYP11B2P19099 503 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 MTMR2Q13614 643 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 CNPY1Q3B7I2 92 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 SBK1Q52WX2 424 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 OR52E8Q6IFG1 317 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 RNF207Q6ZRF8 634 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 NLRP9Q7RTR0 991 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 PROM2Q8N271 834 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 RASGEF1CQ8N431 466 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 MAGEB18Q96M61 343 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 LRMDAQ9H2I8 198 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 FRMD4BQ9Y2L6 1034 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 USP1O94782 785 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 APBA3O96018 575 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 PYGMP11217 842 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 EEF2P13639 858 aaKnown RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 COMTP21964 271 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 SP4Q02446 784 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 KNOP1Q1ED39 458 aaKnown RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 PPP1R21Q6ZMI0 780 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 ANKRD35Q8N283 1001 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 ANKLE1Q8NAG6 615 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 LNX1Q8TBB1 728 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-201ENST00000361716 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 ASB3Q9Y575 518 aa13.51□□□□□ -0.25
VAMP1-201ENST00000361716 SPATA31A6Q5VVP1 1343 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 COL1A1P02452 1464 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-201ENST00000361716 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 CES2O00748 559 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 TBX10O75333 385 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 ATP5HO75947 161 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 OAS1P00973 400 aaKnown RBP13.5□□□□□ -0.25
VAMP1-201ENST00000361716 DESP17661 470 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 COG7P83436 770 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 BTKQ06187 659 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 TMEM62Q0P6H9 643 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
VAMP1-201ENST00000361716 JMJD4Q9H9V9 463 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 ARMCX1Q9P291 453 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
VAMP1-201ENST00000361716 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-201ENST00000361716 ITGA8P53708 1063 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 MAP7Q14244 749 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 RIBC1Q8N443 379 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-201ENST00000361716 NEDD1Q8NHV4 660 aa13.5□□□□□ -0.25
VAMP1-201ENST00000361716 FAM47DPA6NHR8 397 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms