RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 KLHDC7AQ5VTJ3 777 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 SKA2Q8WVK7 121 aaPredicted RBP14.73□□□□□ -0.05
CTR9-201ENST00000361367 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 CPA5Q8WXQ8 436 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 KLRG1Q96E93 195 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
CTR9-201ENST00000361367 TRIM62Q9BVG3 475 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 PIDD1Q9HB75 910 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 SLITRK3O94933 977 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 SEC31AO94979 1220 aaKnown RBP14.73□□□□□ -0.05
CTR9-201ENST00000361367 BCAR1P56945 870 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 INHBEP58166 350 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 PPP4R1Q8TF05 950 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 WNT8AQ9H1J5 351 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 FAM49BQ9NUQ9 324 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 SNX24Q9Y343 169 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 PIK3R2O00459 728 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 APOEP02649 317 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 GYPCP04921 128 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 OR1G1P47890 313 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 CDK17Q00537 523 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 SEPT6Q14141 434 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
CTR9-201ENST00000361367 SCFD1Q8WVM8 642 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 CFAP57Q96MR6 1250 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 KLC2Q9H0B6 622 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 PFDN4Q9NQP4 134 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 SETD4Q9NVD3 440 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 KLK14Q9P0G3 267 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 WDR35Q9P2L0 1181 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
CTR9-201ENST00000361367 TRPA1O75762 1119 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 ITGB3P05106 788 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
CTR9-201ENST00000361367 PCSK1P29120 753 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 KLK7P49862 253 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 GLRA4Q5JXX5 417 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 TTI2Q6NXR4 508 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 TC2NQ8N9U0 490 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 RILPQ96NA2 401 aa14.73□□□□□ -0.05
CTR9-201ENST00000361367 DNAJC17Q9NVM6 304 aaKnown RBP14.73□□□□□ -0.05
CTR9-201ENST00000361367 A0A087WZ62 844 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 GLTPD2A6NH11 291 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 GPR182O15218 404 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CYP3A4P08684 503 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 GARTP22102 1010 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 MSH2P43246 934 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CASP4P49662 377 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 MPZL3Q6UWV2 235 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 MMS22LQ6ZRQ5 1243 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 WHAMMQ8TF30 809 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 FDXACB1Q9BRP7 624 aaPredicted RBP14.72□□□□□ -0.05
CTR9-201ENST00000361367 OLFML3Q9NRN5 406 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 PRG3Q9Y2Y8 225 aaPredicted RBP14.72□□□□□ -0.05
CTR9-201ENST00000361367 DPYSL4O14531 572 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CDH6P55285 790 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 SOX10P56693 466 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 RAPH1Q70E73 1250 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CENPUQ71F23 418 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 VSIG10LQ86VR7 867 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 FAF2Q96CS3 445 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 PNMA5Q96PV4 448 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 ZNF541Q9H0D2 1346 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 DCDC2CA8MYV0 355 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 KPNA6O60684 536 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 FGRP09769 529 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 AKR1A1P14550 325 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 COG7P83436 770 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CUL1Q13616 776 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CENPPQ6IPU0 288 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CHADLQ6NUI6 762 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 CYP39A1Q9NYL5 469 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 UVRAGQ9P2Y5 699 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 HDAC6Q9UBN7 1215 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 NFU1Q9UMS0 254 aa14.72□□□□□ -0.05
CTR9-201ENST00000361367 GMNNO75496 209 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 GNGT1P63211 74 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 THOC5Q13769 683 aaKnown RBP14.71□□□□□ -0.05
CTR9-201ENST00000361367 MICALL1Q8N3F8 863 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 PYROXD1Q8WU10 500 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 STARD7Q9NQZ5 370 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 EML1O00423 815 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 MEIS2O14770 477 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 RALAP11233 206 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 PDGFRAP16234 1089 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 TAF6P49848 677 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 GLE1Q53GS7 698 aaKnown RBP14.71□□□□□ -0.05
CTR9-201ENST00000361367 CLMNQ96JQ2 1002 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 SEMA6BQ9H3T3 888 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 DDX56Q9NY93 547 aaKnown RBP14.71□□□□□ -0.05
CTR9-201ENST00000361367 ZNF131P52739 623 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 CCDC62Q6P9F0 684 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 REPS2Q8NFH8 660 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 FAM71BQ8TC56 605 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.71□□□□□ -0.05
CTR9-201ENST00000361367 DDX47Q9H0S4 455 aaKnown RBP14.71□□□□□ -0.05
CTR9-201ENST00000361367 SMYD2Q9NRG4 433 aa14.71□□□□□ -0.05
CTR9-201ENST00000361367 SKIP12755 728 aa14.71□□□□□ -0.06
CTR9-201ENST00000361367 PNPLA4P41247 253 aa14.71□□□□□ -0.06
CTR9-201ENST00000361367 CACNB2Q08289 660 aaPredicted RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms