RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 FAM86B1E9PN63 330 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 H0Y3Z8 333 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 FAM86B2P0C5J1 330 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 SERPINB6P35237 376 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 HSPA9P38646 679 aaKnown RBP17.34■□□□□ 0.37
SCAF1-201ENST00000360565 PEX19P40855 299 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 ASPHQ12797 758 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 NBPF9Q3BBW0 867 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 ZC3H18Q86VM9 953 aaKnown RBP17.34■□□□□ 0.37
SCAF1-201ENST00000360565 LRRC37BQ96QE4 947 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 MOV10L1Q9BXT6 1211 aaKnown RBP17.34■□□□□ 0.37
SCAF1-201ENST00000360565 CDH16O75309 829 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 ITIH2P19823 946 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 SDC4P31431 198 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 MEI1Q5TIA1 1274 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 AGBL2Q5U5Z8 902 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 WDR59Q6PJI9 974 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 CCDC117Q8IWD4 279 aaPredicted RBP17.33■□□□□ 0.37
SCAF1-201ENST00000360565 MICALL2Q8IY33 904 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 TARS2Q9BW92 718 aaKnown RBP17.33■□□□□ 0.37
SCAF1-201ENST00000360565 ETNK1Q9HBU6 452 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 GTF3C4Q9UKN8 822 aa17.33■□□□□ 0.37
SCAF1-201ENST00000360565 KRT3P12035 628 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 BCAR1P56945 870 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 RHBDL3P58872 404 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 RPS6KA2Q15349 733 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 MDM1Q8TC05 714 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 OTUD5Q96G74 571 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 AIPL1Q9NZN9 384 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 F8VZ95 297 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 CDH6P55285 790 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 STAT4Q14765 748 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 TAF11Q15544 211 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 TRMT10CQ7L0Y3 403 aaKnown RBP17.33■□□□□ 0.36
SCAF1-201ENST00000360565 BTBD6Q96KE9 485 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 GBP5Q96PP8 586 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
SCAF1-201ENST00000360565 EFNA5P52803 228 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 MAPK7Q13164 816 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 P3H1Q32P28 736 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 TKFCQ3LXA3 575 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 C2CD6Q53TS8 623 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 MAP3K21Q5TCX8 1036 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 ATP11CQ8NB49 1132 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 DEPDC1BQ8WUY9 529 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 SPATA33Q96N06 139 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 ANKEF1Q9NU02 776 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 BCAP29Q9UHQ4 241 aa17.33■□□□□ 0.36
SCAF1-201ENST00000360565 ATRNO75882 1429 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 RNF225M0QZC1 329 aaPredicted RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 EPHB6O15197 1021 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 SGPL1O95470 568 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 FAM107AO95990 144 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 PTGISQ16647 500 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 KLHL38Q2WGJ6 581 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 Q4G0T1 1027 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 SLC13A5Q86YT5 568 aaPredicted RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 ANKMY2Q8IV38 441 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 CYFIP2Q96F07 1278 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 TBX20Q9UMR3 447 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 SIK3Q9Y2K2 1263 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 NFAT5O94916 1531 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 PDE2AO00408 941 aaPredicted RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 PRKCBP05771 671 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 EMC2Q15006 297 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 CREG2Q8IUH2 290 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 ZFPM1Q8IX07 1006 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 N4BP2L2Q92802 583 aaPredicted RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 OLFML3Q9NRN5 406 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 PPARGC1AQ9UBK2 798 aaKnown RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 G3BP2Q9UN86 482 aaKnown RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 NOP14P78316 857 aaKnown RBP17.32■□□□□ 0.36
SCAF1-201ENST00000360565 MTM1Q13496 603 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 HIF1AQ16665 826 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 SLC35C1Q96A29 364 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 C18orf8Q96DM3 657 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 ZSWIM1Q9BR11 485 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 TMX2Q9Y320 296 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
SCAF1-201ENST00000360565 KIAA0391O15091 583 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 GPC4O75487 556 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 KRT38O76015 456 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 LUC7L3O95232 432 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 ICAM1P05362 532 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 CAP2P40123 477 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 NFX1Q12986 1120 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 STYK1Q6J9G0 422 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 ARMCX2Q7L311 632 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 APOBEC3FQ8IUX4 373 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 FBXO25Q8TCJ0 367 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 SEC16BQ96JE7 1060 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 KLC4Q9NSK0 619 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 DDX56Q9NY93 547 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 NOP53Q9NZM5 478 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 SLURP2P0DP57 97 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms