RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 FAPQ12884 760 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 DMP1Q13316 513 aaPredicted RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 TOMM20Q15388 145 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 CYTH1Q15438 398 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 FAM178BQ8IXR5 827 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 C7orf31Q8N865 590 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 SPATA33Q96N06 139 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 GINM1Q9NU53 330 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 CTTNBP2NLQ9P2B4 639 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 ARMCX3Q9UH62 379 aaPredicted RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 YDJCA8MPS7 323 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 K7ENM7 598 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 PGRMC1O00264 195 aaKnown RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 SERPINI2O75830 405 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 KRT10P13645 584 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 DRP2Q13474 957 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 VGLL4Q14135 290 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 SEC23AQ15436 765 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 SPATA20Q8TB22 786 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 RAD54LQ92698 747 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 LRRC10BA6NIK2 292 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 TMEM88BA6NKF7 163 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 KRIT1O00522 736 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 CASP1P29466 404 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 AARSP49588 968 aaKnown RBP eCLIP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 PHEXP78562 749 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 CALCOCO2Q13137 446 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 RGMBQ6NW40 437 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 C15orf52Q6ZUT6 534 aaKnown RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 NME8Q8N427 588 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 PNKPQ96T60 521 aa10.55□□□□□ -0.72
SIN3A-201ENST00000360439 FAM217BQ9NTX9 383 aaPredicted RBP10.55□□□□□ -0.72
SIN3A-201ENST00000360439 HSPA6P17066 643 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 NR1D1P20393 614 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 CHKAP35790 457 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 TFDP1Q14186 410 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 LRIG3Q6UXM1 1119 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 SESTD1Q86VW0 696 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 BRSK2Q8IWQ3 736 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 NMD3Q96D46 503 aaKnown RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 MMS19Q96T76 1030 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 EPB41L5Q9HCM4 733 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 CORO1CQ9ULV4 474 aaPredicted RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 STAT1P42224 750 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 NOP14P78316 857 aaKnown RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 GRIN1Q05586 938 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 PDXDC1Q6P996 788 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 P3H4Q92791 437 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 RAB3IPQ96QF0 476 aaPredicted RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 KRT12Q99456 494 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 IDI2Q9BXS1 227 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 ANKFY1Q9P2R3 1169 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 C15orf41Q9Y2V0 281 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 AFPP02771 609 aaKnown RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 CYP2C8P10632 490 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 BCRP11274 1271 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 GAP43P17677 238 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 ADAM9Q13443 819 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 DENND2CQ68D51 928 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 TMC5Q6UXY8 1006 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 TMEM139Q8IV31 216 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 SASH3O75995 380 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 TFRCP02786 760 aaKnown RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 SRGAP2CP0DJJ0 459 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 TNNI1P19237 187 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 CTTNQ14247 550 aaKnown RBP10.54□□□□□ -0.72
SIN3A-201ENST00000360439 ODR4Q5SWX8 454 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 PSMB7Q99436 277 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
SIN3A-201ENST00000360439 KBTBD13C9JR72 458 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 FESP07332 822 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 HABP4Q5JVS0 413 aaKnown RBP10.53□□□□□ -0.72
SIN3A-201ENST00000360439 GABPB2Q8TAK5 448 aaPredicted RBP10.53□□□□□ -0.72
SIN3A-201ENST00000360439 MCUR1Q96AQ8 359 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 NLRP4Q96MN2 994 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 LBHD1Q9BQE6 289 aaPredicted RBP10.53□□□□□ -0.72
SIN3A-201ENST00000360439 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 COL16A1Q07092 1604 aaPredicted RBP10.53□□□□□ -0.72
SIN3A-201ENST00000360439 CXCL11O14625 94 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 CCDC159P0C7I6 412 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 BDNFP23560 247 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 YARSP54577 528 aaKnown RBP10.53□□□□□ -0.72
SIN3A-201ENST00000360439 USP46P62068 366 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 COL9A3Q14050 684 aaPredicted RBP10.53□□□□□ -0.72
SIN3A-201ENST00000360439 PDIA5Q14554 519 aa10.53□□□□□ -0.72
SIN3A-201ENST00000360439 PPP1R15BQ5SWA1 713 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms