RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 SLC16A4O15374 487 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 DPEP1P16444 411 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 RAD23BP54727 409 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.348e-7■■■□□ 18.6
DNMT1-202ENST00000359526 PDIA2Q13087 525 aaKnown RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GPS1Q13098 491 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 FAM129AQ9BZQ8 928 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 PHF2O75151 1096 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 PMLP29590 882 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 MOXD1Q6UVY6 613 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GLYCTKQ8IVS8 523 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GPD1LQ8N335 351 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 HIPK4Q8NE63 616 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 HPCAL4Q9UM19 191 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 FIS1Q9Y3D6 152 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GH1P01241 217 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GYS1P13807 737 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 ITIH2P19823 946 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 OSTNP61366 133 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 STILQ15468 1287 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 C4orf50Q6ZRC1 276 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 OR6B3Q8NGW1 331 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 ZNF473Q8WTR7 871 aaKnown RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 SYN2Q92777 582 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 FAM213AQ9BRX8 229 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 KLHL8Q9P2G9 620 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 ARHGAP10A1A4S6 786 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 SDC4P31431 198 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ROR1Q01973 937 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 SCARF1Q14162 830 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 CDO1Q16878 200 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 EDRF1Q3B7T1 1238 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 MIGA2Q7L4E1 593 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 CATSPER1Q8NEC5 780 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ZNF560Q96MR9 790 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 MAGEB5Q9BZ81 275 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 PITPNM2Q9BZ72 1349 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 hCG_2014768A0A024R1R8 64 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 GUCY1A3Q02108 690 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 WWP1Q9H0M0 922 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 PPP1R12AO14974 1030 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 XPAP23025 273 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 PPP6R3Q5H9R7 873 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 MYLK4Q86YV6 388 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ZBED8Q8IZ13 594 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ALKBH8Q96BT7 664 aaKnown RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 STAMBPL1Q96FJ0 436 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ROPN1BQ9BZX4 212 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 MROH8Q9H579 483 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 ROPN1Q9HAT0 212 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-202ENST00000359526 AMACRQ9UHK6 382 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 TDP2O95551 362 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 IL1R1P14778 569 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 KRT17Q04695 432 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 CUL3Q13618 768 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 LCA5Q86VQ0 697 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 SMARCAD1Q9H4L7 1026 aa12.92□□□□□ -0.34
DNMT1-202ENST00000359526 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 HNRNPH1P31943 449 aaKnown RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 GUCY1A2P33402 732 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 MXD4Q14582 209 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 ITPRIPL1Q6GPH6 555 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 KIAA1841Q6NSI8 718 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 RCOR2Q8IZ40 523 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 AGGF1Q8N302 714 aaeCLIP12.91□□□□□ -0.344e-6■■■■■ 27.3
DNMT1-202ENST00000359526 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 KRT82Q9NSB4 513 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 G3BP2Q9UN86 482 aaKnown RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 NCAPHQ15003 741 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 MAPRE2Q15555 327 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 NAB2Q15742 525 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 KIF19Q2TAC6 998 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 CCT8L2Q96SF2 557 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 CHP1Q99653 195 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 LXNQ9BS40 222 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
DNMT1-202ENST00000359526 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
DNMT1-202ENST00000359526 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms