RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 MUTP22033 750 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 CDK8P49336 464 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 TCEAL1Q15170 157 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 CERKLQ49MI3 558 aaPredicted RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 SPDYAQ5MJ70 313 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 KSR1Q8IVT5 923 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 MAPKAPK5Q8IW41 473 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 CELF1Q92879 486 aaKnown RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 INTS2Q9H0H0 1204 aaKnown RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 APEX2Q9UBZ4 518 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 GCNT3O95395 438 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 SLC34A1Q06495 639 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 KPNB1Q14974 876 aaKnown RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 ZNF746Q6NUN9 644 aaPredicted RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 NLRP9Q7RTR0 991 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 MTDHQ86UE4 582 aaKnown RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 CATSPER3Q86XQ3 398 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 C9orf72Q96LT7 481 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 GBP5Q96PP8 586 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 RUSC1Q9BVN2 902 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 FAM192AQ9GZU8 254 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 CHST7Q9NS84 486 aa19.3■□□□□ 0.68
PTPA-206ENST00000358994 G3BP2Q9UN86 482 aaKnown RBP19.3■□□□□ 0.68
PTPA-206ENST00000358994 PDK4Q16654 411 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 SGO2Q562F6 1265 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 SLC45A4Q5BKX6 768 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 PHLDB3Q6NSJ2 640 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 CLNKQ7Z7G1 428 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 SESTD1Q86VW0 696 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 KBTBD2Q8IY47 623 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 NDNQ99608 321 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 DDX50Q9BQ39 737 aaKnown RBP19.29■□□□□ 0.68
PTPA-206ENST00000358994 CYLDQ9NQC7 956 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 RPS6KL1Q9Y6S9 549 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 PPP1R11O60927 126 aaPredicted RBP19.29■□□□□ 0.68
PTPA-206ENST00000358994 PSMC4P43686 418 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 SPARCL1Q14515 664 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 TRABD2AQ86V40 505 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 KLHL23Q8NBE8 558 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 DTX3LQ8TDB6 740 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 ATG4AQ8WYN0 398 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 DTNBP1Q96EV8 351 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 SAR1AQ9NR31 198 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 PDP2Q9P2J9 529 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 MYO3BQ8WXR4 1341 aa19.29■□□□□ 0.68
PTPA-206ENST00000358994 SPOPO43791 374 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 FGFR1P11362 822 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 PSMC2P35998 433 aaKnown RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 PLEKHG4Q58EX7 1191 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 TRIM74Q86UV6 250 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 TRIM73Q86UV7 250 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 SYT2Q8N9I0 419 aaPredicted RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 UBN1Q9NPG3 1134 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 ANAPC5Q9UJX4 755 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 ROBO1Q9Y6N7 1651 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 PSMG1O95456 288 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 CYP1A1P04798 512 aaPredicted RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 UBTFL6P0CB48 400 aaPredicted RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 TRIM49P0CI25 452 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 TRIM49CP0CI26 452 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 AP1B1Q10567 949 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 STAT4Q14765 748 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 INTS5Q6P9B9 1019 aaKnown RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 OTOAQ7RTW8 1153 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 KRT82Q9NSB4 513 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 NAV1Q8NEY1 1877 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 C2CD2LO14523 706 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 FSCN2O14926 492 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 VPS41P49754 854 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 PTK6Q13882 451 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 CNPY1Q3B7I2 92 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 PABPC1LQ4VXU2 614 aaKnown RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 TXNRD3Q86VQ6 643 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 KIAA0825Q8IV33 1275 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 TRAIPQ9BWF2 469 aa19.28■□□□□ 0.68
PTPA-206ENST00000358994 CHCHD3Q9NX63 227 aaKnown RBP19.28■□□□□ 0.68
PTPA-206ENST00000358994 PDLIM1O00151 329 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 GSC2O15499 205 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 POLD1P28340 1107 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 GCAP28676 217 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 SDCCAG8Q86SQ7 713 aaPredicted RBP19.27■□□□□ 0.68
PTPA-206ENST00000358994 MORC4Q8TE76 937 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 WDR60Q8WVS4 1066 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 CCDC77Q9BR77 488 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 BTBD10Q9BSF8 475 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 ZBTB12Q9Y330 459 aaPredicted RBP19.27■□□□□ 0.68
PTPA-206ENST00000358994 ZMYM2Q9UBW7 1377 aa19.27■□□□□ 0.68
PTPA-206ENST00000358994 PLSCR1O15162 318 aa19.27■□□□□ 0.67
PTPA-206ENST00000358994 PRPF4O43172 522 aaKnown RBP eCLIP19.27■□□□□ 0.672e-7■■■□□ 15.4
PTPA-206ENST00000358994 EXOC3O60645 756 aa19.27■□□□□ 0.67
PTPA-206ENST00000358994 RPA3P35244 121 aaPredicted RBP19.27■□□□□ 0.67
PTPA-206ENST00000358994 MCL1Q07820 350 aa19.27■□□□□ 0.67
PTPA-206ENST00000358994 SLC1A5Q15758 541 aa19.27■□□□□ 0.67
PTPA-206ENST00000358994 WDR72Q3MJ13 1102 aa19.27■□□□□ 0.67
PTPA-206ENST00000358994 PSPC1Q8WXF1 523 aaKnown RBP19.27■□□□□ 0.67
PTPA-206ENST00000358994 NPHS2Q9NP85 383 aa19.27■□□□□ 0.67
PTPA-206ENST00000358994 SFI1A8K8P3 1242 aa19.26■□□□□ 0.67
PTPA-206ENST00000358994 CCDC22O60826 627 aa19.26■□□□□ 0.67
PTPA-206ENST00000358994 MTA2O94776 668 aa19.26■□□□□ 0.67
PTPA-206ENST00000358994 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms