RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 SRLQ86TD4 932 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 TRAIPQ9BWF2 469 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 DBR1Q9UK59 544 aaKnown RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 TXNP10599 105 aaKnown RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 KCNJ1P48048 391 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 TAP1Q03518 808 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 SMAD1Q15797 465 aaKnown RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 RNF139Q8WU17 664 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 MCEEQ96PE7 176 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 MYCBPQ99417 103 aaPredicted RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 SENP7Q9BQF6 1050 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 PPARGC1AQ9UBK2 798 aaKnown RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 CCDC195A0A1B0GUA6 201 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 PFDN6O15212 129 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 HSPA9P38646 679 aaKnown RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 ATP11CQ8NB49 1132 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 CCT8L2Q96SF2 557 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 CPSF2Q9P2I0 782 aaKnown RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 ZFP69BQ9UJL9 534 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 ATP8B3O60423 1300 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 KITP10721 976 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 SYCP2LQ5T4T6 812 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 FBXO41Q8TF61 875 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 NCAPGQ9BPX3 1015 aa15.51■□□□□ 0.07
SLC6A20-202ENST00000358525 CYTH3O43739 400 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 AGTP01019 485 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 SHMT1P34896 483 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 WDR93Q6P2C0 686 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 DHX35Q9H5Z1 703 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 LRRIQ3A6PVS8 624 aaPredicted RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 FOXN3O00409 490 aaPredicted RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 P4HA2O15460 535 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 PSMC6P62333 389 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 ANGEL2Q5VTE6 544 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 RCOR2Q8IZ40 523 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 BBS5Q8N3I7 341 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 PNMA5Q96PV4 448 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 A8MXQ7 604 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 SLC12A6Q9UHW9 1150 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 TBX20Q9UMR3 447 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 FNDC3AQ9Y2H6 1198 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 ICAM1P05362 532 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 EZH2Q15910 746 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 Q4G0T1 1027 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 C18orf8Q96DM3 657 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 C9orf72Q96LT7 481 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 ERP44Q9BS26 406 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 EHD4Q9H223 541 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 Q9H521 79 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 GGT7Q9UJ14 662 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 PHF20L1A8MW92 1017 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 C19orf81C9J6K1 198 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 LPXNO60711 386 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 PEX19P40855 299 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 EIF3EP60228 445 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 HIF1AQ16665 826 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 TKFCQ3LXA3 575 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 JADE1Q6IE81 842 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 SYDE1Q6ZW31 735 aaPredicted RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 COL23A1Q86Y22 540 aaPredicted RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 DUSP9Q99956 384 aaKnown RBP15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 PCDHB2Q9Y5E7 798 aa15.5■□□□□ 0.07
SLC6A20-202ENST00000358525 TCP11X1B4DZS4 312 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 H0Y3Z8 333 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 AKAP3O75969 853 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 HEATR6Q6AI08 1181 aaKnown RBP15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 DNAAF5Q86Y56 855 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 MIPOL1Q8TD10 442 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 ECT2Q9H8V3 914 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 ANKZF1Q9H8Y5 726 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 RNF181Q9P0P0 153 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 IGSF9BQ9UPX0 1349 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 ITIH2P19823 946 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 STAT4Q14765 748 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 RAB44Q7Z6P3 723 aaPredicted RBP15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 LRRC37BQ96QE4 947 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 RBM15Q96T37 977 aaKnown RBP eCLIP15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 NUDT12Q9BQG2 462 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 ANKEF1Q9NU02 776 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 HSPA4LO95757 839 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 IRAK1P51617 712 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 NOP14P78316 857 aaKnown RBP15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 SAMD7Q7Z3H4 446 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 SEPT1Q8WYJ6 367 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 BTBD6Q96KE9 485 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 LRGUKQ96M69 825 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 NUDCD1Q96RS6 583 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 LSP1P33241 339 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 CAP2P40123 477 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 STX1BP61266 288 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 MAP7Q14244 749 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 GMCL1Q96IK5 515 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 AGAP1Q9UPQ3 857 aa15.49■□□□□ 0.07
SLC6A20-202ENST00000358525 GYG2O15488 501 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms