RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, human

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNE2-204	ENST00000358025	ENDOV	Q8N8Q3	282 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	KRT35	Q92764	455 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	LRRC19	Q9H756	370 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	LGALS13	Q9UHV8	139 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	COIL	P38432	576 aa	Predicted RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	GRIK3	Q13003	919 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	ATP6V0A1	Q93050	837 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	THAP11	Q96EK4	314 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	CHAMP1	Q96JM3	812 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	OSBPL10	Q9BXB5	764 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	DDX47	Q9H0S4	455 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	PAK5	Q9P286	719 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	PTBP2	Q9UKA9	531 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	MYO10	Q9HD67	2058 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	FRMPD4	Q14CM0	1322 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	KCNA3	P22001	575 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	RPA1	P27694	616 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	GEMIN4	P57678	1058 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	DUPD1	Q68J44	220 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	AGAP11	Q8TF27	550 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	FAM163A	Q96GL9	167 aa	Predicted RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	DHX33	Q9H6R0	707 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	SIK3	Q9Y2K2	1263 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	RIPK2	O43353	540 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	LDHA	P00338	332 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	WEE2	P0C1S8	567 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	CHN2	P52757	468 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	ADAR	P55265	1226 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	DCAF4	Q8WV16	495 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	MANSC1	Q9H8J5	431 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	GAS2	O43903	313 aa	Known RBP	4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	PAM	P19021	973 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	IL12A	P29459	219 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	PSMB7	Q99436	277 aa		4.35	□□□□□ -1.71
SYNE2-204	ENST00000358025	MYH9	P35579	1960 aa	Known RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	DCAF8L1	A6NGE4	600 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	RAD51C	O43502	376 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	UBOX5	O94941	541 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ACSL3	O95573	720 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	C7	P10643	843 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ZNF200	P98182	395 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	COASY	Q13057	564 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	NKX1-1	Q15270	411 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	RBM20	Q5T481	1227 aa	Known RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MIS18BP1	Q6P0N0	1132 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	GIPC2	Q8TF65	315 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	PUS7L	Q9H0K6	701 aa	Known RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TRPV6	Q9H1D0	765 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MAD1L1	Q9Y6D9	718 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	RCN2	Q14257	317 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MTF1	Q14872	753 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	CASKIN2	Q8WXE0	1202 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	JARID2	Q92833	1246 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MATN2	O00339	956 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	PIK3R2	O00459	728 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ATP4A	P20648	1035 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	GFPT1	Q06210	699 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MFSD4B	Q5TF39	518 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MYO3B	Q8WXR4	1341 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TBKBP1	A7MCY6	615 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ANKS1B	Q7Z6G8	1248 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	RTKN2	Q8IZC4	609 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	COPG2	Q9UBF2	871 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025		A0A087WXM4	84 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	PRMT9	Q6P2P2	845 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	IRX2	Q9BZI1	471 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ADGRA2	Q96PE1	1338 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	NID2	Q14112	1375 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ADAMTS2	O95450	1211 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TUBA3C	Q13748	450 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	NUDCD3	Q8IVD9	361 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	HACE1	Q8IYU2	909 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	MUC13	Q9H3R2	512 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	UTP6	Q9NYH9	597 aa	Known RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TMEM9	Q9P0T7	183 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ZNF609	O15014	1411 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	PPID	Q08752	370 aa	Known RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TFDP3	Q5H9I0	405 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	NFRKB	Q6P4R8	1299 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	LRRC6	Q86X45	466 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TRABD	Q9H4I3	376 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	TMPRSS15	P98073	1019 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	OTUD7B	Q6GQQ9	843 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	CEP44	Q9C0F1	390 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ANKH	Q9HCJ1	492 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	FAM153A	Q9UHL3	310 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	ALG6	Q9Y672	507 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	AGPS	O00116	658 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	WNT7A	O00755	349 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	GPC4	O75487	556 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	KRT3	P12035	628 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	KRT10	P13645	584 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	CACNA2D1	P54289	1103 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	OLFM1	Q99784	485 aa		4.34	□□□□□ -1.71
SYNE2-204	ENST00000358025	HDAC6	Q9UBN7	1215 aa		4.34	□□□□□ -1.71

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