RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 NUDT17P0C025 328 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 TAL1P17542 331 aaPredicted RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 HOXA7P31268 230 aaPredicted RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 HAS1Q92839 578 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 ZNF317Q96PQ6 595 aaPredicted RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 PFASO15067 1338 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 AFF2P51816 1311 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 CD58P19256 250 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 ATP4AP20648 1035 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 PALB2Q86YC2 1186 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 BBOF1Q8ND07 529 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 ITFG2Q969R8 447 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 ADAM22Q9P0K1 906 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 A0A0A6YYK5 440 aaPredicted RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 TCRBV7S2A1N4TA0A589 114 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 EME2A4GXA9 379 aaPredicted RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 I3L4J1 428 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 MARK3P27448 753 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 ECHS1P30084 290 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 LIG4P49917 911 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 GRIK5Q16478 980 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 MAK16Q9BXY0 300 aaKnown RBP13.33□□□□□ -0.28
BDNF-202ENST00000356660 TRIM55Q9BYV6 548 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
BDNF-202ENST00000356660 CAPN9O14815 690 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 PAEPP09466 180 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 KITP10721 976 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 ITIH2P19823 946 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 VAMP7P51809 220 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 IRX4P78413 519 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 GPS1Q13098 491 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 PPARGC1AQ9UBK2 798 aaKnown RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 PIAS1O75925 651 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 SGPL1O95470 568 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 TTC4O95801 387 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 MAN1A1P33908 653 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 HSPA1LP34931 641 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 STAT2P52630 851 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 NPEPPSP55786 919 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 P3H1Q32P28 736 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 TMEM59LQ9UK28 342 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 AJAP1Q9UKB5 411 aaPredicted RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 TOPAZ1Q8N9V7 1692 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 RTN2O75298 545 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 PECAM1P16284 738 aaPredicted RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 CALB2P22676 271 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 ANXA13P27216 316 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 IGBP1P78318 339 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 ZNF268Q14587 947 aaPredicted RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 CBWD6Q4V339 395 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 CBWD3Q5JTY5 395 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 CBWD5Q5RIA9 395 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 SYCP2LQ5T4T6 812 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 CEP128Q6ZU80 1094 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 MTDHQ86UE4 582 aaKnown RBP13.32□□□□□ -0.28
BDNF-202ENST00000356660 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 MIPOL1Q8TD10 442 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 SLC5A5Q92911 643 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 C11orf70Q9BRQ4 267 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 TRAIPQ9BWF2 469 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 KCTD10Q9H3F6 313 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 BCAS3Q9H6U6 928 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 GINM1Q9NU53 330 aa13.32□□□□□ -0.28
BDNF-202ENST00000356660 ZBTB39O15060 712 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 PFDN1O60925 122 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 PIK3CAP42336 1068 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 CRKP46108 304 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 ARFIP2P53365 341 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 YWHAGP61981 247 aaKnown RBP eCLIP13.31□□□□□ -0.28
BDNF-202ENST00000356660 KLRC3Q07444 240 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 BSPRYQ5W0U4 402 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 PRUNE1Q86TP1 453 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 PYROXD1Q8WU10 500 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 RNPEPL1Q9HAU8 725 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
BDNF-202ENST00000356660 COMMD10Q9Y6G5 202 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 ANKRD63C9JTQ0 380 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 O00370 1275 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 MT-ND3P03897 115 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 CHKAP35790 457 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 PRKCIP41743 596 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 MAGEA4P43358 317 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
BDNF-202ENST00000356660 RIPK1Q13546 671 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms