RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 NXPE3Q969Y0 559 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 TCHPQ9BT92 498 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 RHOBTB2Q9BYZ6 727 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 PRKD2Q9BZL6 878 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.73□□□□□ -0.53
CAPN3-204ENST00000356316 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 DENND4AQ7Z401 1863 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 CLUHO75153 1309 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 H0Y858 1186 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 RPL17P18621 184 aaKnown RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 RFX1P22670 979 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 PEX3P56589 373 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 NBR1Q14596 966 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 ECM1Q16610 540 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 LIN9Q5TKA1 542 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 LILRA6Q6PI73 481 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 PRSS55Q6UWB4 352 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 KIFC3Q9BVG8 833 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 CCDC94Q9BW85 323 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 TOPORSQ9NS56 1045 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 CACNG4Q9UBN1 327 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 USP20Q9Y2K6 914 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
CAPN3-204ENST00000356316 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
CAPN3-204ENST00000356316 H3BQV1 296 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 PTGESO14684 152 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 ZMYND10O75800 440 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 B3GAT3O94766 335 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 KIF4AO95239 1232 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 PRPHP41219 470 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-204ENST00000356316 DMP1Q13316 513 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-204ENST00000356316 RABEP1Q15276 862 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 PSMD5Q16401 504 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 RTP2Q5QGT7 225 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 PPM1LQ5SGD2 360 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 NT5DC1Q5TFE4 455 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 EEF1DP3Q658K8 133 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 TMEM105Q8N8V8 129 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 FEZF2Q8TBJ5 459 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 PIK3R5Q8WYR1 880 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 CDK5RAP3Q96JB5 506 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 UROC1Q96N76 676 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 KIF2CQ99661 725 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 C17orf75Q9HAS0 396 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 POLIQ9UNA4 740 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 DUSP12Q9UNI6 340 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
CAPN3-204ENST00000356316 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-204ENST00000356316 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 E9PMD0 336 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 XYLBO75191 536 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 HNRNPA1P09651 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 LAMP2P13473 410 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 FSHRP23945 695 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 NPTX2P47972 431 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 CLCNKBP51801 687 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 SMTNP53814 917 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 STRN3Q13033 797 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 GET4Q7L5D6 327 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 SIX5Q8N196 739 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 SLC44A3Q8N4M1 653 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 ACAP3Q96P50 834 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 RTP3Q9BQQ7 232 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 CLSTN3Q9BQT9 956 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 MRPL4Q9BYD3 311 aaKnown RBP11.7□□□□□ -0.54
CAPN3-204ENST00000356316 TMEM134Q9H6X4 195 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 FAM86C1Q9NVL1 165 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 EPS15L1Q9UBC2 864 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 WNT16Q9UBV4 365 aa11.7□□□□□ -0.54
CAPN3-204ENST00000356316 PP2D1A8MPX8 630 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 HIP1RO75146 1068 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 C8AP07357 584 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 CFHP08603 1231 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 CDC25AP30304 524 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 OR1D2P34982 312 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 GRM5P41594 1212 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 OSTNP61366 133 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms