RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CETN3O15182 167 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 IL18RAPO95256 599 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 ADRB2P07550 413 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 CXCL8P10145 99 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 RNASELQ05823 741 aaKnown RBP16.9■□□□□ 0.3
TRIM13-201ENST00000356017 SURF1Q15526 300 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 ENOX2Q16206 610 aaKnown RBP16.9■□□□□ 0.3
TRIM13-201ENST00000356017 FIBCD1Q8N539 461 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 PBX4Q9BYU1 374 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 RBAKQ9NYW8 714 aaPredicted RBP16.9■□□□□ 0.3
TRIM13-201ENST00000356017 CARNS1A5YM72 827 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 MAPK13O15264 365 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 THP07101 528 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 KCNE1P15382 129 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 GATMP50440 423 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 PMS1P54277 932 aaKnown RBP16.89■□□□□ 0.29
TRIM13-201ENST00000356017 TYRO3Q06418 890 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 GRIK3Q13003 919 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
TRIM13-201ENST00000356017 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 TTI2Q6NXR4 508 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 BRSK2Q8IWQ3 736 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 RDH13Q8NBN7 331 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 GSTCDQ8NEC7 633 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 FAM193BQ96PV7 902 aaPredicted RBP16.89■□□□□ 0.29
TRIM13-201ENST00000356017 TBC1D13Q9NVG8 400 aa16.89■□□□□ 0.29
TRIM13-201ENST00000356017 SMIM28A0A1B0GU29 152 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 SYCE3A1L190 88 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 TRIM49BA6NDI0 452 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 FGFR1OPO95684 399 aaKnown RBP16.88■□□□□ 0.29
TRIM13-201ENST00000356017 POMCP01189 267 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 PSMC2P35998 433 aaKnown RBP16.88■□□□□ 0.29
TRIM13-201ENST00000356017 SCNN1GP51170 649 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 ZSCAN23Q3MJ62 389 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 USP37Q86T82 979 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 NT5DC4Q86YG4 428 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 ZSWIM2Q8NEG5 633 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 CEP63Q96MT8 703 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 MKNK1Q9BUB5 465 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 NAT10Q9H0A0 1025 aaKnown RBP16.88■□□□□ 0.29
TRIM13-201ENST00000356017 DERAQ9Y315 318 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 RWDD3Q9Y3V2 267 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 LACTBL1A8MY62 500 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 PTGESO14684 152 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 XPOTO43592 962 aaKnown RBP16.88■□□□□ 0.29
TRIM13-201ENST00000356017 CA3P07451 260 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
TRIM13-201ENST00000356017 STX17P56962 302 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 ZC3H3Q8IXZ2 948 aaKnown RBP16.88■□□□□ 0.29
TRIM13-201ENST00000356017 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 MIOSQ9NXC5 875 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
TRIM13-201ENST00000356017 COL4A6Q14031 1691 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
TRIM13-201ENST00000356017 EPB41P11171 864 aaKnown RBP16.87■□□□□ 0.29
TRIM13-201ENST00000356017 PBX2P40425 430 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 CYP24A1Q07973 514 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
TRIM13-201ENST00000356017 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
TRIM13-201ENST00000356017 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 MFSD14AQ96MC6 490 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 PPP1R10Q96QC0 940 aaKnown RBP16.87■□□□□ 0.29
TRIM13-201ENST00000356017 FNBP1Q96RU3 617 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 SLC28A3Q9HAS3 691 aa16.87■□□□□ 0.29
TRIM13-201ENST00000356017 LCHNA4D1U4 455 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 LINC01553A4QN01 128 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 SLC16A3O15427 465 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 MEFVO15553 781 aaPredicted RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 AKAP3O75969 853 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 GNA14O95837 355 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 MYOGP15173 224 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 LAG3P18627 525 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 DNAJB2P25686 324 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 ALDH7A1P49419 539 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 CASP4P49662 377 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 ENPEPQ07075 957 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 TUSC3Q13454 348 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 PSMD6Q15008 389 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 TPD52L1Q16890 204 aaPredicted RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 INTS8Q75QN2 995 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 FAM186BQ8IYM0 893 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 ZMAT2Q96NC0 199 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 SAMD11Q96NU1 681 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 DUSP9Q99956 384 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 PLAGL2Q9UPG8 496 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 YBX2Q9Y2T7 364 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 MRPL42Q9Y6G3 142 aaKnown RBP16.86■□□□□ 0.29
TRIM13-201ENST00000356017 PTPRSQ13332 1948 aa16.86■□□□□ 0.29
TRIM13-201ENST00000356017 TULP1O00294 542 aaPredicted RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 ALDH2P05091 517 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 KRT13P13646 458 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms