RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
VPS13A-201ENST00000355766 FAM86C1Q9NVL1 165 aa7.86□□□□□ -1.15
VPS13A-201ENST00000355766 CYP39A1Q9NYL5 469 aa7.86□□□□□ -1.15
VPS13A-201ENST00000355766 RTEL1Q9NZ71 1219 aa7.86□□□□□ -1.15
VPS13A-201ENST00000355766 SCN10AQ9Y5Y9 1956 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 A0A1W2PQ27 194 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 A0A1W2PQ64 194 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 A0A1W2PQD8 194 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 RBM47A0AV96 593 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 ESYT2A0FGR8 921 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 TMEM221A6NGB7 291 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 M0R296 226 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 NBNO60934 754 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 PRPF40AO75400 957 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 PARP1P09874 1014 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 SCG2P13521 617 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 STAT2P52630 851 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 TRAF1Q13077 416 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 ORC2Q13416 577 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 CYP27C1Q4G0S4 372 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 BRDTQ58F21 947 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 DTHD1Q6ZMT9 781 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 ZNF574Q6ZN55 896 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 EP400NLQ6ZTU2 488 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 RPAINQ86UA6 219 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 WFDC3Q8IUB2 231 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 NOSTRINQ8IVI9 506 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 LRRC47Q8N1G4 583 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 LEO1Q8WVC0 666 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 DHX38Q92620 1227 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 CEP95Q96GE4 821 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 SPATA32Q96LK8 384 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 SAMD11Q96NU1 681 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 CTAGE1Q96RT6 745 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 ARID3AQ99856 593 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 TMEM47Q9BQJ4 181 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 WDR11Q9BZH6 1224 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 GLT8D2Q9H1C3 349 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 ATXN3LQ9H3M9 355 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 ALG13Q9NP73 1137 aaKnown RBP7.85□□□□□ -1.15
VPS13A-201ENST00000355766 CLDND1Q9NY35 253 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 CLIP2Q9UDT6 1046 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 RCOR1Q9UKL0 485 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 STX8Q9UNK0 236 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 SLC5A6Q9Y289 635 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 PCDHGC5Q9Y5F6 944 aa7.85□□□□□ -1.15
VPS13A-201ENST00000355766 MYH6P13533 1939 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 LOC102724159A0A0B4J2E5 919 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 TMEM232C9JQI7 657 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 H3BNC9 293 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 NKRFO15226 690 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 FIBPO43427 364 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 MBTPS2O43462 519 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 KPNA6O60684 536 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 PPP6R2O75170 966 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 FAM87AP0C7U9 286 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 ALAS1P13196 640 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 ALDH5A1P51649 535 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 HTRA4P83105 476 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 PWP2Q15269 919 aaKnown RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 PTGISQ16647 500 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 EPC2Q52LR7 807 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 MUM1L1Q5H9M0 696 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 L1TD1Q5T7N2 865 aaKnown RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 NSMFQ6X4W1 530 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 ERMP1Q7Z2K6 904 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 PDZD3Q86UT5 571 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 FAM160B2Q86V87 743 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 SESTD1Q86VW0 696 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 SMYD4Q8IYR2 804 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 DCAF4Q8WV16 495 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 PHKBQ93100 1093 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 ASIC4Q96FT7 647 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 MYL10Q9BUA6 226 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 PHF20Q9BVI0 1012 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 KRT82Q9NSB4 513 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 DDX19AQ9NUU7 478 aaKnown RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 GPN3Q9UHW5 284 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-201ENST00000355766 MAD2L2Q9UI95 211 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 CEP131Q9UPN4 1083 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 INSL6Q9Y581 213 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 ZDBF2Q9HCK1 2354 aa7.84□□□□□ -1.15
VPS13A-201ENST00000355766 LCTP09848 1927 aa7.84□□□□□ -1.16
VPS13A-201ENST00000355766 TCHHQ07283 1943 aa7.84□□□□□ -1.16
VPS13A-201ENST00000355766 C5orf42Q9H799 3197 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 MYO15AQ9UKN7 3530 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 KMT2EQ8IZD2 1858 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 FSD2A1L4K1 749 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 GOLGA6L4A6NEF3 574 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 NCK2O43639 380 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 NMT2O60551 498 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 CAVIN2O95810 425 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 PDHBP11177 359 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 CKBP12277 381 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 RXRAP19793 462 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 KRT2P35908 639 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 LTBRP36941 435 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 BNIP3Q12983 259 aa7.83□□□□□ -1.16
VPS13A-201ENST00000355766 IKQ13123 557 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms