RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 GGCXP38435 758 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 AARSP49588 968 aaKnown RBP eCLIP19.04■□□□□ 0.643e-6■■■■■ 35.7
COL18A1-202ENST00000355480 ST8SIA6P61647 398 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 ATG9AQ7Z3C6 839 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 NR1H4Q96RI1 486 aaPredicted RBP19.04■□□□□ 0.64
COL18A1-202ENST00000355480 EIF2AQ9BY44 585 aaKnown RBP19.04■□□□□ 0.64
COL18A1-202ENST00000355480 ZFYVE28Q9HCC9 887 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 HMBSP08397 361 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 R3HDM1Q15032 1099 aaKnown RBP19.04■□□□□ 0.64
COL18A1-202ENST00000355480 IER5Q5VY09 327 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 EFHBQ8N7U6 833 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 KLHL11Q9NVR0 708 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 SYCE1LA8MT33 242 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 TMEM62Q0P6H9 643 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 PPHLN1Q8NEY8 458 aaKnown RBP19.04■□□□□ 0.64
COL18A1-202ENST00000355480 H0Y3Z8 333 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 SLC16A3O15427 465 aaKnown RBP19.03■□□□□ 0.64
COL18A1-202ENST00000355480 NEUROG2Q9H2A3 272 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 KCNB1Q14721 858 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 CLEC10AQ8IUN9 316 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 HPS3Q969F9 1004 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 GGA3Q9NZ52 723 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 LMNAP02545 664 aaKnown RBP19.03■□□□□ 0.64
COL18A1-202ENST00000355480 KRT17Q04695 432 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 NCAPHQ15003 741 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 CDC42EP5Q6NZY7 148 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 A0A1W2PQC6 194 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 KCNN4O15554 427 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 ENTPD3O75355 529 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 NR3C2P08235 984 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 ARFIP2P53365 341 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 GYS2P54840 703 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 ST13P4Q8IZP2 240 aaPredicted RBP19.03■□□□□ 0.64
COL18A1-202ENST00000355480 TGS1Q96RS0 853 aaKnown RBP19.03■□□□□ 0.64
COL18A1-202ENST00000355480 TAF1DQ9H5J8 278 aaPredicted RBP19.03■□□□□ 0.64
COL18A1-202ENST00000355480 PCDHGB4Q9UN71 923 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 ADGRG1Q9Y653 693 aa19.03■□□□□ 0.64
COL18A1-202ENST00000355480 SESN2P58004 480 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-202ENST00000355480 LBHD1Q9BQE6 289 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-202ENST00000355480 ZFATQ9P243 1243 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF189O75820 626 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-202ENST00000355480 SYF2O95926 243 aaKnown RBP19.02■□□□□ 0.64
COL18A1-202ENST00000355480 MCF2P10911 925 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 TEDDM1Q5T9Z0 273 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 MTBPQ96DY7 904 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 A2ML1A8K2U0 1454 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 STXBP3O00186 592 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 SLC1A1P43005 524 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 STILQ15468 1287 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 ATP5HO75947 161 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 FAM117BQ6P1L5 589 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 RGS9BPQ6ZS82 235 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 AGR3Q8TD06 166 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 NYAP2Q9P242 653 aa19.02■□□□□ 0.64
COL18A1-202ENST00000355480 WARS2Q9UGM6 360 aaKnown RBP19.02■□□□□ 0.64
COL18A1-202ENST00000355480 RNF103-CHMP3A0A140T963 221 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 RPS6KA5O75582 802 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 PDGFRBP09619 1106 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 PPP2R2AP63151 447 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 PRAMEF18Q5VWM3 479 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 AGAP3Q96P47 875 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 CHCHD3Q9NX63 227 aaKnown RBP19.02■□□□□ 0.63
COL18A1-202ENST00000355480 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.63
COL18A1-202ENST00000355480 VGLL3A8MV65 326 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 PDGFRAP16234 1089 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 NCOA4Q13772 614 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 EMC2Q15006 297 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 GTF2H3Q13889 308 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 HIF1AQ16665 826 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 MFN1Q8IWA4 741 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 CPA5Q8WXQ8 436 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 SEPT5Q99719 369 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 TRIM9Q9C026 710 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 KDM6AO15550 1401 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 GNL1P36915 607 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 POLE2P56282 527 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 SYTL3Q4VX76 610 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 ZC3H12BQ5HYM0 836 aaKnown RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 DHX40Q8IX18 779 aaKnown RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 SLC30A5Q8TAD4 765 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 RNPC3Q96LT9 517 aaKnown RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 REEP2Q9BRK0 252 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 FBXO2Q9UK22 296 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 PRR12Q9ULL5 1215 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 C3orf70A6NLC5 250 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 PRRG1O14668 218 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 MAGEB2O15479 319 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 LRRC37BQ96QE4 947 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 GPBP1L1Q9HC44 474 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 JCADQ9P266 1359 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 SYCP2LQ5T4T6 812 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 ANKMY2Q8IV38 441 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 MED15Q96RN5 788 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 ALDH8A1Q9H2A2 487 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-202ENST00000355480 SYNDIG1Q9H7V2 258 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 APEX2Q9UBZ4 518 aa19.01■□□□□ 0.63
COL18A1-202ENST00000355480 GFAPP14136 432 aa19■□□□□ 0.63
COL18A1-202ENST00000355480 DHX34Q14147 1143 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms