RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 HUS1O60921 280 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.31
COLCA1-201ENST00000355430 ITKQ08881 620 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 MEA1Q16626 185 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 KCTD6Q8NC69 237 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 CALN1Q9BXU9 219 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 NAGPAQ9UK23 515 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 SCINQ9Y6U3 715 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 PDE2AO00408 941 aaPredicted RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 MAGEB2O15479 319 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 PON1P27169 355 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 MEI1Q5TIA1 1274 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 XRRA1Q6P2D8 792 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 DARS2Q6PI48 645 aaKnown RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CATSPER3Q86XQ3 398 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 ATG4CQ96DT6 458 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 ETNK1Q9HBU6 452 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 TRIM17Q9Y577 477 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CACNA1FO60840 1977 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 TJP3O95049 919 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 NR3C2P08235 984 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 FAM153BP0C7A2 387 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 SMARCA1P28370 1054 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 NOGQ13253 232 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 IL17AQ16552 155 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 FAM153CQ494X1 144 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CREG2Q8IUH2 290 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 SYT17Q9BSW7 474 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 EHD4Q9H223 541 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 IL17RBQ9NRM6 502 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 FAM153AQ9UHL3 310 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 NR2E3Q9Y5X4 410 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 SYNJ2BP-COX16A0A087WUM0 186 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 PFDN6O15212 129 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 TMEM253P0C7T8 217 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 YAF2Q8IY57 180 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 RAB3IL1Q8TBN0 382 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 MAML1Q92585 1016 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CDCA5Q96FF9 252 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 ERP44Q9BS26 406 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 SPATS2LQ9NUQ6 558 aaKnown RBP13.08□□□□□ -0.32
COLCA1-201ENST00000355430 COX16Q9P0S2 106 aa13.08□□□□□ -0.32
COLCA1-201ENST00000355430 CYP11B2P19099 503 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 VEPH1Q14D04 833 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 CEP55Q53EZ4 464 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 SPATA21Q7Z572 469 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 WNT7AO00755 349 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 IL1R1P14778 569 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
COLCA1-201ENST00000355430 TSEN2Q8NCE0 465 aaKnown RBP13.07□□□□□ -0.32
COLCA1-201ENST00000355430 NCAPGQ9BPX3 1015 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
COLCA1-201ENST00000355430 TRIM4Q9C037 500 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 AAASQ9NRG9 546 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 UBR1Q8IWV7 1749 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 TRPA1O75762 1119 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 NFKBIAP25963 317 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 SERPINB6P35237 376 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 FKBP1AP62942 108 aaKnown RBP13.07□□□□□ -0.32
COLCA1-201ENST00000355430 KRT39Q6A163 491 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 ZFP69BQ9UJL9 534 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 RCCD1A6NED2 376 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 PDHXO00330 501 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 ESRRAP11474 423 aaPredicted RBP13.07□□□□□ -0.32
COLCA1-201ENST00000355430 TMEM270Q6UE05 265 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 RYBPQ8N488 228 aaPredicted RBP13.07□□□□□ -0.32
COLCA1-201ENST00000355430 OR6B3Q8NGW1 331 aa13.07□□□□□ -0.32
COLCA1-201ENST00000355430 RRN3P2A6NIE6 340 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 MED24O75448 989 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 BFSP2Q13515 415 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 ZNF394Q53GI3 561 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 ZNF667Q5HYK9 610 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 WDR59Q6PJI9 974 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 CYFIP1Q7L576 1253 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 ZNF507Q8TCN5 953 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 PITPNM2Q9BZ72 1349 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 HSD3B7Q9H2F3 369 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms