RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TMEM132DQ14C87 1099 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.18
SCN8A-202ENST00000355133 FAM117BQ6P1L5 589 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 PPP1R36Q96LQ0 422 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 TRIM62Q9BVG3 475 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 ADAM33Q9BZ11 813 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 PFASO15067 1338 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 RBP5P82980 135 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 DMTNQ08495 405 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 PLA2G4FQ68DD2 849 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 TRIM9Q9C026 710 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 SLC7A5P2Q9GIP4 190 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ING2Q9H160 280 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 AMACRQ9UHK6 382 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 TRAPPC3O43617 180 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 MYO1DO94832 1006 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ASMTLO95671 621 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 KCNB1Q14721 858 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 SMARCAD1Q9H4L7 1026 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 KIF17Q9P2E2 1029 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 FBXL5Q9UKA1 691 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 A0A1W2PQC6 194 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ZNF507Q8TCN5 953 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 A2ML1A8K2U0 1454 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 MYBP10242 640 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 MCF2P10911 925 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 KCNJ6P48051 423 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ARL8AQ96BM9 186 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 PREX2Q70Z35 1606 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 KBTBD13C9JR72 458 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 CYBBP04839 570 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 NR3C2P08235 984 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 IRF1P10914 325 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ACTR2P61160 394 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 SNAPC2Q13487 334 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ST13P4Q8IZP2 240 aaPredicted RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 PPHLN1Q8NEY8 458 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 TEKT4Q8WW24 435 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 ALDH8A1Q9H2A2 487 aaPredicted RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 WARS2Q9UGM6 360 aaKnown RBP13.95□□□□□ -0.18
SCN8A-202ENST00000355133 PRR12Q9ULL5 1215 aa13.95□□□□□ -0.18
SCN8A-202ENST00000355133 SYCE1LA8MT33 242 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 GH1P01241 217 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 AARSP49588 968 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 EMC2Q15006 297 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 SEPT1Q8WYJ6 367 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 DPF2Q92785 391 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 SPON1Q9HCB6 807 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 PSMD14O00487 310 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 PDGFRAP16234 1089 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 NCOA4Q13772 614 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 ACBD5Q5T8D3 534 aaPredicted RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 SH3TC2Q8TF17 1288 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 LPAR1Q92633 364 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 DCUN1D1Q96GG9 259 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 CLMNQ96JQ2 1002 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 LRRC37BQ96QE4 947 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 DDX50Q9BQ39 737 aaKnown RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 RNF103-CHMP3A0A140T963 221 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 HIF1AQ16665 826 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 ZFATQ9P243 1243 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 APEX2Q9UBZ4 518 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 HACL1Q9UJ83 578 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 GMNCA6NCL1 334 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 C19orf81C9J6K1 198 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 GOLGA8RI6L899 631 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 LMNAP02545 664 aaKnown RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 TRIM28Q13263 835 aaKnown RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 ZC3H15Q8WU90 426 aaKnown RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 NR1H4Q96RI1 486 aaPredicted RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
SCN8A-202ENST00000355133 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 ADAM21Q9UKJ8 722 aa13.94□□□□□ -0.18
SCN8A-202ENST00000355133 SNRNP35Q16560 246 aaKnown RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 RFX8Q6ZV50 586 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 SLC35G2Q8TBE7 412 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 KCNV2Q8TDN2 545 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 SEPT5Q99719 369 aaPredicted RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 TMEM106CQ9BVX2 250 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 GRAP2O75791 330 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 MS4A14Q96JA4 679 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 MCEEQ96PE7 176 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 TIPINQ9BVW5 301 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 CCDC90BQ9GZT6 254 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 FAM95CA0A1B0GW59 222 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 ZNF185O15231 689 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 TMED1Q13445 227 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 RABL6Q3YEC7 729 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms