RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ZHX2Q9Y6X8 837 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 C16orf96A6NNT2 1141 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 QARSP47897 775 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 EIF3EP60228 445 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 KRT76Q01546 638 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ATPAF2Q8N5M1 289 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 GFM2Q969S9 779 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 CLMNQ96JQ2 1002 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 CAPN10Q9HC96 672 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 SCN3BQ9NY72 215 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ASAP1Q9ULH1 1129 aa6.09□□□□□ -1.43
SRGAP1-201ENST00000355086 ZNF518AQ6AHZ1 1483 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 SLC16A4O15374 487 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 SESN2P58004 480 aaPredicted RBP6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 LCORLQ8N3X6 602 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 TNIP3Q96KP6 325 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 TBC1D22BQ9NU19 505 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ARHGEF38Q9NXL2 777 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 CDYLQ9Y232 598 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ZBTB12Q9Y330 459 aaPredicted RBP6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 RGS4P49798 205 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 MTHFD1LQ6UB35 978 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 NLRP9Q7RTR0 991 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ZNF560Q96MR9 790 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ARSEP51690 589 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ALDH6A1Q02252 535 aaKnown RBP6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ADCK5Q3MIX3 580 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 SWSAP1Q6NVH7 229 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 PADI6Q6TGC4 694 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 PARP9Q8IXQ6 854 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ASZ1Q8WWH4 475 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 ELMO2Q96JJ3 720 aa6.09□□□□□ -1.44
SRGAP1-201ENST00000355086 PRKAB2O43741 272 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 DGKHQ86XP1 1220 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 C10orf53Q8N6V4 93 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GRAMD1AQ96CP6 724 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 POLR3FQ9H1D9 316 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 FAM135BQ49AJ0 1406 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 NUP62P37198 522 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CCDC137Q6PK04 289 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 OOSP2Q86WS3 158 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SH3GL2Q99962 352 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ETNK1Q9HBU6 452 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 RSPH10B2B2RC85 870 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 RSPH10BP0C881 870 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 KNOP1Q1ED39 458 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 EXOSC4Q9NPD3 245 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ARHGEF3Q9NR81 526 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 UTP6Q9NYH9 597 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 DDHD2O94830 711 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ENO3P13929 434 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 RPS6P62753 249 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GPR108Q9NPR9 543 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 LGALS16A8MUM7 142 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CYP21A2P08686 494 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 MAGEA9P43362 315 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CLK1P49759 484 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PTRHD1Q6GMV3 140 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 C3orf70A6NLC5 250 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 KIZQ2M2Z5 673 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 TNIP2Q8NFZ5 429 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 TMEM106CQ9BVX2 250 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 MTIF3Q9H2K0 278 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SLC30A1Q9Y6M5 507 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ABCB11O95342 1321 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 TCP11X1B4DZS4 312 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GGPS1O95749 300 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PGM1P36871 562 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 HS6ST3Q8IZP7 471 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 KRCC1Q9NPI7 259 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PLOD1Q02809 727 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 KDSRQ06136 332 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ANKS6Q68DC2 871 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 FOXP4Q8IVH2 680 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 RHOT1Q8IXI2 618 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 TBC1D23Q9NUY8 699 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GGCXP38435 758 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 KCNQ4P56696 695 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ZNF211Q13398 564 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GRAPQ13588 217 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 NCAPHQ15003 741 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SFR1Q86XK3 245 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GRAPLQ8TC17 118 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 BBS2Q9BXC9 721 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SEC31BQ9NQW1 1179 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 POTECB2RU33 542 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PWP1Q13610 501 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CENPTQ96BT3 561 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PUS7LQ9H0K6 701 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SESN1Q9Y6P5 492 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GRIN2AQ12879 1464 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PRUNE1Q86TP1 453 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 APOBEC3FQ8IUX4 373 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ANKMY2Q8IV38 441 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CMTM5Q96DZ9 223 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 STAMBPL1Q96FJ0 436 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms