RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 MCPH1Q8NEM0 835 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 GDAP1Q8TB36 358 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 CCDC59Q9P031 241 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 SNX12Q9UMY4 172 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 VPS4BO75351 444 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 YWHAHQ04917 246 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 DDR1Q08345 913 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 FNIP1Q8TF40 1166 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 PDCD10Q9BUL8 212 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ACTL7BQ9Y614 415 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 FDX1P10109 184 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 DAB2P98082 770 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 DCAF15Q66K64 600 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 STAG2Q8N3U4 1231 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 GRID1Q9ULK0 1009 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 RAD54BQ9Y620 910 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 FMN2Q9NZ56 1722 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PIGBOS1A0A0B4J2F0 54 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PDE8AO60658 829 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 NSL1Q96IY1 281 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 MAGEB10Q96LZ2 347 aaPredicted RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 ZNF711Q9Y462 761 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 MAGI2Q86UL8 1455 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 LOC102724159A0A0B4J2E5 919 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 MXI1P50539 228 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PDCLQ13371 301 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PWP2Q15269 919 aaKnown RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 RRM2BQ7LG56 351 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 P3H2Q8IVL5 708 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PDPRQ8NCN5 879 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 SLC26A7Q8TE54 656 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 B4E1Z4 1266 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 ERVV-2B6SEH9 535 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 GADD45BO75293 160 aaPredicted RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 FAM58BPP0C7Q3 252 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 TXKP42681 527 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 C2orf54Q08AI8 447 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 CCDC157Q569K6 752 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 OSCP1Q8WVF1 389 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 VAT1LQ9HCJ6 419 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 ZCCHC11Q5TAX3 1644 aaKnown RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 H3BMM5 538 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 IRS4O14654 1257 aaPredicted RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 SGMS1Q86VZ5 419 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 LCORLQ8N3X6 602 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 VPS33AQ96AX1 596 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 PCDHA5Q9Y5H7 936 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 TNRQ92752 1358 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 KRT31Q15323 416 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 KYNUQ16719 465 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 DGUOKQ16854 277 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 NOD2Q9HC29 1040 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 CDYLQ9Y232 598 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 TAF4O00268 1085 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 CTSWP56202 376 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 STRA8Q7Z7C7 330 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 FAM227BQ96M60 508 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 UNC45AQ9H3U1 944 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 TOPORSQ9NS56 1045 aaPredicted RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 PHF11Q9UIL8 331 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 TTLL3Q9Y4R7 772 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 ATP10BO94823 1461 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 MBD5Q9P267 1494 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 CLEC4FQ8N1N0 589 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 SENP7Q9BQF6 1050 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 NCAM2O15394 837 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 TSNQ15631 228 aaKnown RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 NOA1Q8NC60 698 aaKnown RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 FAM89AQ96GI7 184 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 RBM17Q96I25 401 aaKnown RBP8.43□□□□□ -1.06
HTT-201ENST00000355072 AMNQ9BXJ7 453 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 GPC5P78333 572 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 ROR1Q01973 937 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 MTFR1Q15390 333 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 PPLO60437 1756 aa8.43□□□□□ -1.06
HTT-201ENST00000355072 WARSP23381 471 aaKnown RBP8.42□□□□□ -1.06
HTT-201ENST00000355072 DMPKQ09013 629 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 ANO4Q32M45 955 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 PRMT1Q99873 361 aaKnown RBP8.42□□□□□ -1.06
HTT-201ENST00000355072 CHCHD6Q9BRQ6 235 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
HTT-201ENST00000355072 ACEP12821 1306 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 URB1O60287 2271 aaKnown RBP8.42□□□□□ -1.06
HTT-201ENST00000355072 C15orf38-AP3S2A0A0A6YYH1 394 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 IMPDH2P12268 514 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 LRRC31Q6UY01 552 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 ARPINQ7Z6K5 226 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 NLRC4Q9NPP4 1024 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 TNFAIP2Q03169 654 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 NAB1Q13506 487 aa8.42□□□□□ -1.06
HTT-201ENST00000355072 APPL2Q8NEU8 664 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms