RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 RINLQ6ZS11 566 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 RFX8Q6ZV50 586 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 TRABD2AQ86V40 505 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 PALB2Q86YC2 1186 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 SLC13A5Q86YT5 568 aaPredicted RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 PPP2R3CQ969Q6 453 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 RMI1Q9H9A7 625 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 TAS2R1Q9NYW7 299 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 KANSL3Q9P2N6 904 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 MTUS1Q9ULD2 1270 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 ANKRD62A6NC57 917 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 A8MXQ7 604 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 PRPF4O43172 522 aaKnown RBP eCLIP8.36□□□□□ -1.07
CD46-203ENST00000354848 PDE8AO60658 829 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 HAUS5O94927 633 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 OR6B1O95007 311 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 ANPEPP15144 967 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 SOX5P35711 763 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 ITGA8P53708 1063 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 PLOD1Q02809 727 aaPredicted RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 SULT2A1Q06520 285 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 CDC16Q13042 620 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 SATL1Q86VE3 508 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 RNF168Q8IYW5 571 aaPredicted RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 NSL1Q96IY1 281 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 SYT11Q9BT88 431 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 RAB34Q9BZG1 259 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 IL17RBQ9NRM6 502 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 ASIC3Q9UHC3 531 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 DCTN4Q9UJW0 460 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 MYH11P35749 1972 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 ZMYM2Q9UBW7 1377 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 TMEM110-MUSTN1A8MSY1 372 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 TOM1O60784 492 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 OPHN1O60890 802 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ZNF189O75820 626 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 HNRNPCP07910 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
CD46-203ENST00000354848 CYP2D6P10635 497 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 IVDP26440 423 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 RPA3P35244 121 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 STAT4Q14765 748 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 C11orf63Q6NUN7 778 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 KLC3Q6P597 504 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CCDC65Q8IXS2 484 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 WDR66Q8TBY9 1149 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ZNF398Q8TD17 642 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ABTB1Q969K4 478 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 IQCGQ9H095 443 aaKnown RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 DNAJC18Q9H819 358 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 C6orf50Q9HD87 102 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 BMP2KQ9NSY1 1161 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 TRMT112Q9UI30 125 aaKnown RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 HARSP12081 509 aaKnown RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 GNA11P29992 359 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ORC2Q13416 577 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 SLC1A5Q15758 541 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 FYB2Q5VWT5 728 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 RNF207Q6ZRF8 634 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ACAD11Q709F0 780 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 RHOT2Q8IXI1 618 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 RFWD2Q8NHY2 731 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 SLC35B4Q969S0 331 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 HAUS1Q96CS2 278 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 SNF8Q96H20 258 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CCDC77Q9BR77 488 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 TUBB6Q9BUF5 446 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 MAF1Q9H063 256 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CPVLQ9H3G5 476 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 EBF3Q9H4W6 596 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 LRRC19Q9H756 370 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.35□□□□□ -1.07
CD46-203ENST00000354848 PAPPAQ13219 1627 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 SMIM31A0A1B0GVY4 71 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 RBM47A0AV96 593 aaKnown RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 AKAP3O75969 853 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 TDP2O95551 362 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 COMTP21964 271 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CETN2P41208 172 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ERFP50548 548 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CASP5P51878 434 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 HADHBP55084 474 aaKnown RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 LLGL1Q15334 1064 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CCDC174Q6PII3 467 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ZNF554Q86TJ5 538 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ZNF75CPQ92670 426 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 SLC35C1Q96A29 364 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 PPP1R14BQ96C90 147 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 ZNF653Q96CK0 615 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 PRR11Q96HE9 360 aaPredicted RBP8.35□□□□□ -1.07
CD46-203ENST00000354848 C9orf72Q96LT7 481 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 CATSPER2Q96P56 530 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 TRABDQ9H4I3 376 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms