RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 RGS16O15492 202 aaPredicted RBP13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 SPATA31C1P0DKV0 1188 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 SV2AQ7L0J3 742 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 SLC35G2Q8TBE7 412 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 TIPINQ9BVW5 301 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 PRG3Q9Y2Y8 225 aaPredicted RBP13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 RNF40O75150 1001 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 LCP1P13796 627 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 MAN1A1P33908 653 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 THPOP40225 353 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 PSMC4P43686 418 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 NUMBP49757 651 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 UBA3Q8TBC4 463 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 DNAJC19Q96DA6 116 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 PORCNQ9H237 461 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
PCDHB11-201ENST00000354757 ECEL1O95672 775 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 IFNAR2P48551 515 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 CASP8Q14790 479 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 C1orf54Q8WWF1 131 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 RFFLQ8WZ73 363 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 BTBD6Q96KE9 485 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 STMN4Q9H169 189 aaPredicted RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 CAPN7Q9Y6W3 813 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 GOLGA8MH3BSY2 632 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 CALCAP01258 141 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 CXCL8P10145 99 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 RDM1Q8NG50 284 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 TMEM8AQ9HCN3 771 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 ARHGAP20Q9P2F6 1191 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 BNIP3LO60238 219 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 MOCS2O96007 188 aaPredicted RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 RGS2P41220 211 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 DR1Q01658 176 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 NME3Q13232 169 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 PLCB4Q15147 1175 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 DARS2Q6PI48 645 aaKnown RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 MKNK1Q9BUB5 465 aa13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
PCDHB11-201ENST00000354757 ANKRD63C9JTQ0 380 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 EXTL3O43909 919 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 YY1P25490 414 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 GTF2H1P32780 548 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 MMP14P50281 582 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 SREBF2Q12772 1141 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 RWDD4Q6NW29 188 aaKnown RBP13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 C1orf186Q6ZWK4 172 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 SIK2Q9H0K1 926 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 CAPN6Q9Y6Q1 641 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 SGPL1O95470 568 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 ACSL3O95573 720 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 PGK1P00558 417 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 ARL4AP40617 200 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 KAT5Q92993 513 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 TATDN2Q93075 761 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 PBKQ96KB5 322 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 CYP3A4P08684 503 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 MAGEA9P43362 315 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 FCGRTP55899 365 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 PPIL2Q13356 520 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 BBS9Q3SYG4 887 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 ATP8B4Q8TF62 1192 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 TMEM117Q9H0C3 514 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 INTS13Q9NVM9 706 aa13.15□□□□□ -0.3
PCDHB11-201ENST00000354757 EPHB6O15197 1021 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 OGTO15294 1046 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 CREB3O43889 395 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 TOM1L1O75674 476 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 GNGT1P63211 74 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 CYP4A22Q5TCH4 519 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms