RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 EDN1P05305 212 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 TM4SF4P48230 202 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 IFT88Q13099 833 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 EXOC3L4Q17RC7 722 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 MICALCLQ6ZW33 695 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 HAUS6Q7Z4H7 955 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 SMC1BQ8NDV3 1235 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 TMEM161BQ8NDZ6 487 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 BORCS6Q96GS4 357 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 TINF2Q9BSI4 451 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 BZW2Q9Y6E2 419 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF236Q9UL36 1845 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 KAT6AQ92794 2004 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 RBM47A0AV96 593 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 TMCO5BA8MYB1 307 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 ANKRD63C9JTQ0 380 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 KRIT1O00522 736 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 EIF3DO15371 548 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 DAPK3O43293 454 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 LGR5O75473 907 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 NR3C1P04150 777 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 GJB1P08034 283 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 TMOD1P28289 359 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 MAPK4P31152 587 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 NCKAP1LP55160 1127 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 HTRA3P83110 453 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 DCAF17Q5H9S7 520 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 RNF187Q5TA31 235 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 SLC39A4Q6P5W5 647 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 C6orf89Q6UWU4 347 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 FRMD5Q7Z6J6 570 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 ASAP3Q8TDY4 903 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 LRRC45Q96CN5 670 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 CYFIP2Q96F07 1278 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 NIFKQ9BYG3 293 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 DHX33Q9H6R0 707 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
TRIM55-204ENST00000353317 SEL1LQ9UBV2 794 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 FBXL5Q9UKA1 691 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 NENFQ9UMX5 172 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 SLC15A5A6NIM6 579 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 SRRM3A6NNA2 597 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 TTLL13PA6NNM8 815 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 DCDC2CA8MYV0 355 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 IGHA2P01877 340 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 XRCC5P13010 732 aaKnown RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CYP2B6P20813 491 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 ADSSP30520 456 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 PRKCIP41743 596 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 GTF2BQ00403 316 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 TTLL4Q14679 1199 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 PLCB4Q15147 1175 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 IFI16Q16666 785 aaKnown RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 OTUD6AQ7L8S5 288 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 PEX26Q7Z412 305 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF467Q7Z7K2 595 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 SLFN11Q7Z7L1 901 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 ARFGAP2Q8N6H7 521 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 AFG1LQ8WV93 481 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 UBLCP1Q8WVY7 318 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CABS1Q96KC9 395 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CBWD1Q9BRT8 395 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CELF4Q9BZC1 486 aaKnown RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 PCIF1Q9H4Z3 704 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 LRRC4CQ9HCJ2 640 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 AGPAT3Q9NRZ7 376 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 DMAC2Q9NW81 257 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 BCCIPQ9P287 314 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 LARSQ9P2J5 1176 aaKnown RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CNOT8Q9UFF9 292 aaKnown RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CCDC169A6NNP5 214 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 TTI1O43156 1089 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 TRAPPC3O43617 180 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF286BP0CG31 522 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 GLRA2P23416 452 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 MAP2K5Q13163 448 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 ACVR2BQ13705 512 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 EMC2Q15006 297 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 QPCTQ16769 361 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 GJB7Q6PEY0 223 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 PAXIP1Q6ZW49 1069 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 NT5DC3Q86UY8 548 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 CCDC13Q8IYE1 715 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 RASGEF1CQ8N431 466 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 GLG1Q92896 1179 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF668Q96K58 619 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 NTPCRQ9BSD7 190 aaKnown RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 POLR3FQ9H1D9 316 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-204ENST00000353317 SIX2Q9NPC8 291 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 GGA2Q9UJY4 613 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 STXBP5LQ9Y2K9 1186 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
TRIM55-204ENST00000353317 GMNCA6NCL1 334 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 CCDC188H7C350 402 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 DDX3XO00571 662 aaKnown RBP eCLIP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 LRRN2O75325 713 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 DGAT1O75907 488 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 TOMM70O94826 608 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms