RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SNF8Q96H20 258 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 MMADHCQ9H3L0 296 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 STARD13Q9Y3M8 1113 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 PALM3A6NDB9 673 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 HNRNPRO43390 633 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 EXOC3O60645 756 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 T-ENOLP0DO92 83 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CETPP11597 493 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CYP11B2P19099 503 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CYP4A11Q02928 519 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 PHLDB2Q86SQ0 1253 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ZDHHC14Q8IZN3 488 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ST13P4Q8IZP2 240 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 MIPOL1Q8TD10 442 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 SLC20A1Q8WUM9 679 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 NSUN4Q96CB9 384 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF184Q99676 751 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 PLVAPQ9BX97 442 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 HEMGNQ9BXL5 484 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CADM1Q9BY67 442 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 IKZF4Q9H2S9 585 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 SYNCQ9H7C4 482 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TYW1Q9NV66 732 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 NINJ2Q9NZG7 142 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ATXN10Q9UBB4 475 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 KDM3AQ9Y4C1 1321 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 ANXA13P27216 316 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 PIK3CAP42336 1068 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 NEK3P51956 506 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 GPC5P78333 572 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 TMED1Q13445 227 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 TMEM119Q4V9L6 283 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 SYT2Q8N9I0 419 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 NRG4Q8WWG1 115 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 RPGRQ92834 1020 aaKnown RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 FAM192AQ9GZU8 254 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 SUDS3Q9H7L9 328 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 HEY2Q9UBP5 337 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 EYA4O95677 639 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 LYNP07948 512 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 DESP17661 470 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 ITIH2P19823 946 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 PGM1P36871 562 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 MARSP56192 900 aaKnown RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 USP46P62068 366 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 PPP2R5CQ13362 524 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 MDH1BQ5I0G3 518 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 MYLK4Q86YV6 388 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF384Q8TF68 577 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 SNRNP27Q8WVK2 155 aaKnown RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 PTPRN2Q92932 1015 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 SLC35C1Q96A29 364 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 FAM136AQ96C01 138 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 EYA3Q99504 573 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 STK33Q9BYT3 514 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 DNAJC18Q9H819 358 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 ZWILCHQ9H900 591 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 SAYSD1Q9NPB0 183 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 UBE2TQ9NPD8 197 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-201ENST00000352993 ANGPTL2Q9UKU9 493 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 KIAA1551Q9HCM1 1747 aa8.12□□□□□ -1.11
BRCA1-201ENST00000352993 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 GOLGA8RI6L899 631 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ZBED4O75132 1171 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 CIB2O75838 187 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 PLS3P13797 630 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 IL2RBP14784 551 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 SERPINB3P29508 390 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 RPA3P35244 121 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 RTP1P59025 263 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 KCNA1Q09470 495 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 TNFAIP8L3Q5GJ75 292 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 LVRNQ6Q4G3 990 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 LCA5Q86VQ0 697 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 PIGBQ92521 554 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 AGPAT1Q99943 283 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 BTBD10Q9BSF8 475 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 SIX2Q9NPC8 291 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 DNM3Q9UQ16 869 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 EP400Q96L91 3159 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 NCANO14594 1321 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 RSPH10B2B2RC85 870 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 FOXN3O00409 490 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ATP6V1G1O75348 118 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ZWINTO95229 277 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 GGPS1O95749 300 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 RSPH10BP0C881 870 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 CTNNA2P26232 953 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 OCRLQ01968 901 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ISLR2Q6UXK2 745 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 WDR60Q8WVS4 1066 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 TUBGCP5Q96RT8 1024 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 MIPEPQ99797 713 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 TIPINQ9BVW5 301 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 DHX36Q9H2U1 1008 aaKnown RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 CHST7Q9NS84 486 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ARL8BQ9NVJ2 186 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms