RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FBXO2Q9UK22 296 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-201ENST00000345617 MYL2P10916 166 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 NCAPHQ15003 741 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 TMEM161AQ9NX61 479 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 O00370 1275 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 KCNA2P16389 499 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 TTC39BQ5VTQ0 682 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-201ENST00000345617 VPS37AQ8NEZ2 397 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 VPS33BQ9H267 617 aa20.37■□□□□ 0.85
HDAC4-201ENST00000345617 TRIM49P0CI25 452 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 TRIM49CP0CI26 452 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 ADD2P35612 726 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 RTN2O75298 545 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 TMEM270Q6UE05 265 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 MAGED4Q96JG8 741 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 KCNB1Q14721 858 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 TTC23LQ6PF05 361 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 C7orf31Q8N865 590 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 DCLRE1BQ9H816 532 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 RWDD3Q9Y3V2 267 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 PNMA8CA0A1B0GUJ8 204 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 NCF4Q15080 339 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 TRIM13O60858 407 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 SEC24DO94855 1032 aaPredicted RBP20.36■□□□□ 0.85
HDAC4-201ENST00000345617 KNOP1Q1ED39 458 aaKnown RBP20.36■□□□□ 0.85
HDAC4-201ENST00000345617 FLAD1Q8NFF5 587 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 QKIQ96PU8 341 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■■■□ 21.5
HDAC4-201ENST00000345617 MLXIPLQ9NP71 852 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 CALML6Q8TD86 181 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 ERP27Q96DN0 273 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 MAGED2Q9UNF1 606 aaPredicted RBP20.36■□□□□ 0.85
HDAC4-201ENST00000345617 STX7O15400 261 aaKnown RBP20.36■□□□□ 0.85
HDAC4-201ENST00000345617 CLASP2O75122 1294 aaKnown RBP20.36■□□□□ 0.85
HDAC4-201ENST00000345617 NCKAP1LP55160 1127 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 RCSD1Q6JBY9 416 aa20.36■□□□□ 0.85
HDAC4-201ENST00000345617 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
HDAC4-201ENST00000345617 LRRC41Q15345 812 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 PRPF39Q86UA1 669 aaKnown RBP20.35■□□□□ 0.85
HDAC4-201ENST00000345617 RAD21L1Q9H4I0 556 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 KIAA0391O15091 583 aaKnown RBP20.35■□□□□ 0.85
HDAC4-201ENST00000345617 GNA15P30679 374 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 CC2D2BQ6DHV5 1058 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 RHPN2Q8IUC4 686 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 CNDP1Q96KN2 507 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 TRIM24O15164 1050 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 KLHL12Q53G59 568 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 BBS2Q9BXC9 721 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 CITO14578 2027 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 CLDN3O15551 220 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 SRP72O76094 671 aaKnown RBP20.35■□□□□ 0.85
HDAC4-201ENST00000345617 GUF1Q8N442 669 aaKnown RBP20.35■□□□□ 0.85
HDAC4-201ENST00000345617 ATAD3AQ9NVI7 634 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 PSMC3P17980 439 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 SCP2P22307 547 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 KYNUQ16719 465 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 ZFP42Q96MM3 310 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 IMPAD1Q9NX62 359 aa20.35■□□□□ 0.85
HDAC4-201ENST00000345617 FGFR4P22455 802 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 MICU2Q8IYU8 434 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 THTPAQ9BU02 230 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 KLHL4Q9C0H6 718 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 H2AFY2Q9P0M6 372 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-201ENST00000345617 PRR23AA6NEV1 266 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 FAM160B2Q86V87 743 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 TMA16Q96EY4 203 aaKnown RBP20.34■□□□□ 0.85
HDAC4-201ENST00000345617 RHBDL2Q9NX52 303 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-201ENST00000345617 ANKARQ7Z5J8 1434 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 PCDHB6Q9Y5E3 794 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 TALDO1P37837 337 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 HSD17B4P51659 736 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 LCORLQ8N3X6 602 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 RBM15Q96T37 977 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDAC4-201ENST00000345617 TIPINQ9BVW5 301 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 CHMP2BQ9UQN3 213 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 ADGRL3Q9HAR2 1447 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 SFNP31947 248 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 PHKA2P46019 1235 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 FAM162AQ96A26 154 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 KRT6BP04259 564 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 KRT6CP48668 564 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 DDX47Q9H0S4 455 aaKnown RBP20.34■□□□□ 0.85
HDAC4-201ENST00000345617 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-201ENST00000345617 NOD2Q9HC29 1040 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 SOX13Q9UN79 622 aa20.34■□□□□ 0.85
HDAC4-201ENST00000345617 TMC5Q6UXY8 1006 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 BCAMP50895 628 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 FAM45BPQ6NSW5 357 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 LRRC8DQ7L1W4 858 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 SP110Q9HB58 689 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 ARL8AQ96BM9 186 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 MKL2Q9ULH7 1088 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 BMP3P12645 472 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 RTL3Q8N8U3 475 aaKnown RBP20.33■□□□□ 0.85
HDAC4-201ENST00000345617 DDX50Q9BQ39 737 aaKnown RBP20.33■□□□□ 0.85
HDAC4-201ENST00000345617 CARD9Q9H257 536 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms