RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PDLIM7Q9NR12 457 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 RASAL2Q9UJF2 1139 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 ANAPC7Q9UJX3 599 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 EBAG9O00559 213 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 SUPT20HL2P0C7V6 817 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 SEC24CP53992 1094 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 DHX34Q14147 1143 aaKnown RBP15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 SUPT20HL1Q3ZLR7 823 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 ACAD10Q6JQN1 1059 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 CD101Q93033 1021 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 ARHGAP28Q9P2N2 729 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 ZNF112Q9UJU3 913 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 NOVA2Q9UNW9 492 aaKnown RBP15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 SMIM23A6NLE4 172 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 SPDYE16A6NNV3 312 aaPredicted RBP15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 PIK3CAP42336 1068 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 STRN3Q13033 797 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 PPP2R5EQ16537 467 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 SEZ6Q53EL9 994 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 ZBTB41Q5SVQ8 909 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 DAB2IPQ5VWQ8 1189 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 CATSPERGQ6ZRH7 1159 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 PASD1Q8IV76 773 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 UHMK1Q8TAS1 419 aaKnown RBP15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 ASAP3Q8TDY4 903 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 CDHR1Q96JP9 859 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 ZDHHC18Q9NUE0 388 aa15.96■□□□□ 0.15
VIPAS39-202ENST00000343765 PTPRJQ12913 1337 aa15.96■□□□□ 0.14
VIPAS39-202ENST00000343765 DOCK1Q14185 1865 aa15.96■□□□□ 0.14
VIPAS39-202ENST00000343765 FAM187AA6NFU0 413 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 SPATA31C2B4DYI2 1134 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 KIAA0391O15091 583 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 CLDN3O15551 220 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 GRIN3BO60391 1043 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 ERLIN2O94905 339 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 ATP4AP20648 1035 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 GARTP22102 1010 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 MDH1P40925 334 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 PTGIRP43119 386 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 RPL21P46778 160 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 OAZ1P54368 228 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 CLEC16AQ2KHT3 1053 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 XKR3Q5GH77 459 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 PHIPQ8WWQ0 1821 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 EXTL3O43909 919 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 MTA2O94776 668 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 HLA-DRAP01903 254 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 SHBGP04278 402 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 TMOD1P28289 359 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 CHRNA3P32297 505 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 GTF2H1P32780 548 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 TCEAL1Q15170 157 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 UBAP2Q5T6F2 1119 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 ZDHHC24Q6UX98 284 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 RUFY4Q6ZNE9 571 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 SLC13A5Q86YT5 568 aaPredicted RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 ANKRD35Q8N283 1001 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 PPANQ9NQ55 473 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 ZNF302Q9NR11 478 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 AGO2Q9UKV8 859 aaKnown RBP15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 ADAMTS5Q9UNA0 930 aa15.95■□□□□ 0.14
VIPAS39-202ENST00000343765 RARAP10276 462 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 CTNNA2P26232 953 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 MAPK4P31152 587 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 MAGOHP61326 146 aaKnown RBP15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 WDR44Q5JSH3 913 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 DEPTORQ8TB45 409 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 HAPLN2Q9GZV7 340 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 RASSF4Q9H2L5 321 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 UVRAGQ9P2Y5 699 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 PCDHA3Q9Y5H8 950 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 NFASCO94856 1347 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 PARP14Q460N5 1801 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 C19orf81C9J6K1 198 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 PPFIA2O75334 1257 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 RRM1P23921 792 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 RWDD2BP57060 319 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 SNX1Q13596 522 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 CLUL1Q15846 466 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 C1orf54Q8WWF1 131 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 C12orf42Q96LP6 360 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 TARS2Q9BW92 718 aaKnown RBP15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 GRHL1Q9NZI5 618 aa15.94■□□□□ 0.14
VIPAS39-202ENST00000343765 FZD9O00144 591 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 CFHP08603 1231 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 GLRA2P23416 452 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 PMS2P54278 862 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 GCNT1Q02742 428 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 STXBP2Q15833 593 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 PTGISQ16647 500 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 EEPD1Q7L9B9 569 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 RBAKQ9NYW8 714 aaPredicted RBP15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 MTUS1Q9ULD2 1270 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 RLFQ13129 1914 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 TLDC2A0PJX2 215 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms