RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 TARSL2A2RTX5 802 aaKnown RBP20.14■□□□□ 0.81
UBTF-202ENST00000343638 PDHXO00330 501 aa20.14■□□□□ 0.81
UBTF-202ENST00000343638 CHRNA3P32297 505 aa20.14■□□□□ 0.81
UBTF-202ENST00000343638 HYIQ5T013 277 aa20.14■□□□□ 0.81
UBTF-202ENST00000343638 RIOX2Q8IUF8 465 aa20.14■□□□□ 0.81
UBTF-202ENST00000343638 ECM1Q16610 540 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 GABPB2Q8TAK5 448 aaPredicted RBP20.13■□□□□ 0.81
UBTF-202ENST00000343638 CCNYQ8ND76 341 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 NIF3L1Q9GZT8 377 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 PCSK1NQ9UHG2 260 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 MAD1L1Q9Y6D9 718 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 ZSCAN26Q16670 478 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 EPC2Q52LR7 807 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 LRRC55Q6ZSA7 311 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 BCAS4Q8TDM0 211 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 ATP8B4Q8TF62 1192 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 ZNF560Q96MR9 790 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 POP1Q99575 1024 aaKnown RBP20.13■□□□□ 0.81
UBTF-202ENST00000343638 SNX9Q9Y5X1 595 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 MYPNQ86TC9 1320 aa20.13■□□□□ 0.81
UBTF-202ENST00000343638 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
UBTF-202ENST00000343638 BUB1BO60566 1050 aaPredicted RBP20.12■□□□□ 0.81
UBTF-202ENST00000343638 CLTAP09496 248 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 GTF2H1P32780 548 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 BASP1P80723 227 aaKnown RBP20.12■□□□□ 0.81
UBTF-202ENST00000343638 PPP6R3Q5H9R7 873 aaPredicted RBP20.12■□□□□ 0.81
UBTF-202ENST00000343638 AMACRQ9UHK6 382 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 NUP98P52948 1817 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 STRNO43815 780 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 SDC4P31431 198 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 YWHAGP61981 247 aaKnown RBP eCLIP20.12■□□□□ 0.81
UBTF-202ENST00000343638 TFDP2Q14188 446 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 TAS1R2Q8TE23 839 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 GOLPH3Q9H4A6 298 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 POC1B-GALNT4F8VUJ3 575 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 KRT7P08729 469 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 HSD17B4P51659 736 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 SV2AQ7L0J3 742 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 C18orf8Q96DM3 657 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 EFCC1Q9HA90 598 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 NHSL1Q5SYE7 1610 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 ATRNL1Q5VV63 1379 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 SART1O43290 800 aaKnown RBP20.12■□□□□ 0.81
UBTF-202ENST00000343638 CYP2C8P10632 490 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 SLC1A1P43005 524 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 NNTQ13423 1086 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 FAM102AQ5T9C2 384 aaPredicted RBP20.12■□□□□ 0.81
UBTF-202ENST00000343638 AFG1LQ8WV93 481 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 SSX2IPQ9Y2D8 614 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 ALG6Q9Y672 507 aa20.12■□□□□ 0.81
UBTF-202ENST00000343638 ATP9AO75110 1047 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 WEE2P0C1S8 567 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 TAP1Q03518 808 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 PPIL2Q13356 520 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 GNASQ5JWF2 1037 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 MMS22LQ6ZRQ5 1243 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 MICALL1Q8N3F8 863 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 TTC13Q8NBP0 860 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 ZNF280AP59817 542 aaPredicted RBP20.11■□□□□ 0.81
UBTF-202ENST00000343638 CYP24A1Q07973 514 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
UBTF-202ENST00000343638 CAPN6Q9Y6Q1 641 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 F8VZ95 297 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 CLK2P49760 499 aaKnown RBP20.11■□□□□ 0.81
UBTF-202ENST00000343638 ZNF677Q86XU0 584 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 NOA1Q8NC60 698 aaKnown RBP20.11■□□□□ 0.81
UBTF-202ENST00000343638 AIPL1Q9NZN9 384 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 NFKBIEO00221 500 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 ADAMTS3O15072 1205 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 EIF3BP55884 814 aaKnown RBP20.11■□□□□ 0.81
UBTF-202ENST00000343638 TRAPPC11Q7Z392 1133 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 MTMR8Q96EF0 704 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 VAV3Q9UKW4 847 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
UBTF-202ENST00000343638 KRT3P12035 628 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 CCDC137Q6PK04 289 aaKnown RBP20.1■□□□□ 0.81
UBTF-202ENST00000343638 ZNF571Q7Z3V5 609 aaPredicted RBP20.1■□□□□ 0.81
UBTF-202ENST00000343638 CCDC60Q8IWA6 550 aaPredicted RBP20.1■□□□□ 0.81
UBTF-202ENST00000343638 SENP7Q9BQF6 1050 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 ATP8B3O60423 1300 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 FAM187AA6NFU0 413 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 PABPN1LA6NDY0 278 aaKnown RBP20.1■□□□□ 0.81
UBTF-202ENST00000343638 ERVK-9P63128 1117 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 SLC35G1Q2M3R5 365 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 FYB2Q5VWT5 728 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 COG1Q8WTW3 980 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 SMARCAL1Q9NZC9 954 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 CASZ1Q86V15 1759 aa20.1■□□□□ 0.81
UBTF-202ENST00000343638 ZC3H11AO75152 810 aaKnown RBP eCLIP20.09■□□□□ 0.815e-7■■■■□ 22.5
UBTF-202ENST00000343638 SF3A3Q12874 501 aaKnown RBP eCLIP20.09■□□□□ 0.81
UBTF-202ENST00000343638 COBLL1Q53SF7 1204 aa20.09■□□□□ 0.81
UBTF-202ENST00000343638 DNAJC17Q9NVM6 304 aaKnown RBP20.09■□□□□ 0.81
UBTF-202ENST00000343638 CPA4Q9UI42 421 aa20.09■□□□□ 0.81
UBTF-202ENST00000343638 SIK3Q9Y2K2 1263 aa20.09■□□□□ 0.81
UBTF-202ENST00000343638 ASTN2O75129 1339 aaPredicted RBP20.09■□□□□ 0.81
UBTF-202ENST00000343638 H3BRB1 525 aa20.09■□□□□ 0.81
UBTF-202ENST00000343638 SLCO1A2P46721 670 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms